Gene TRQ2_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1346 
SymbolrplM 
ID6092788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1378514 
End bp1378963 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content47% 
IMG OID642488548 
Product50S ribosomal protein L13 
Protein accessionYP_001739373 
Protein GI170289135 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000278561 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGGT ACTTTCCTGT TCAGAAGACA ACTATGATAA AACCCGAAGA GGTTGAAAGA 
AAATGGTACG TGGTAGATGC TTCCGGAAAG GTTCTCGGAA GACTCGCGAC ACGCATAGCG
AAGATATTGA TGGGGAAACA CAAGCCCAAT TACACTCCGC ACGTTGACAC GGGAGATTAC
GTCATCGTTG TGAACGCTGA CAAGGTGGTT CTTACCGGAA AGAAGCTCGA TCAGAAGGTT
TATTACTGGC ATTCTGGTTA TCCCGGAGGT CTGAAGTCTC TGACAGCAAG ACAGATGCTG
GAAAAGCATC CCGAAAGACT CATATGGCTC GCTGTCAAAA GGATGCTCCC GAAGAACAGA
AAGGGCAGAA AAATGCTCAA AAGACTCAAA GTTTATGCGT CACCCGAACA TCCACATCAG
GCACAGAAAC CTGAGCCTAT TGAACTGTGA
 
Protein sequence
MARYFPVQKT TMIKPEEVER KWYVVDASGK VLGRLATRIA KILMGKHKPN YTPHVDTGDY 
VIVVNADKVV LTGKKLDQKV YYWHSGYPGG LKSLTARQML EKHPERLIWL AVKRMLPKNR
KGRKMLKRLK VYASPEHPHQ AQKPEPIEL