Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1288 |
Symbol | |
ID | 6092729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1315677 |
End bp | 1318034 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642488489 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001739315 |
Protein GI | 170289077 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAGAA TCGATCTAAA TGGTTTCTGG AACGTCAGTG ATAACGAAGG GAGATTTTCG TTTGAAGGGA CAGTGCCGGG GGTTGTCCAG GCAGATCTTA TCAGAGAAGG TCTCCTTCCA CACCCGTACG TTGGGATGAA CGAAGATCTC TTCAAGGAAA TAGAAGACAG AGAGTGGATC TACGAGAGGG AGTTCGAGTT CAAAGAAGAT GTGAAAGAAG GAGAACGTGT CGATCTAGTT TTTGAAGGTG TCGACACGCT GTCGGATGTT TATCTGAACG GTGTTTACCT CGGGAGCACC GAAGACATGT TCATCGAGTA TCGCTTCGAT GTCACGAACG TGTTGAAAGA AAAGAATCAC CTGAAGGTGT ACATAAAATC TCCCATCAGA GTTCCGAAAA TTCTCGAGCA GAACTACGGG GTCCTCGGCG GTCCTGAAGA TCCCATCAGA GGATACATAA GAAAGGCCCA GTATTCGTAC GGATGGGACT GGGGTGCCAG AATGGTCACA AGCGGTATTT GGAAACCCGT CTATCTCGAG GTGTACAAGG CACGTCTTCA GGATTCAACG GCTTATCTGC TGGAGCTTGA GGGAAAAGAT GCCCTTGTGA GGGTGAACGG TTTTGTATAC GGGGAAGGAA ATCTCAGTGT GGAAGTTTAT GTGAACGGTG AAAAGATAGG GGAGTTTCCT GTTCTTGAAA AGAACGGAGA AAGACTCTTC GATGGAGTGT TTCACCTGGA AGATGTGAAA CTATGGTATC CGTGGAACGT GGGGGAACCG TACCTGTACG ATTTCGCCTT CGTATTGAAA GATTCGAATG GAGAAATCTA CAGAGAAGAA AAGAAAATCG GTTTGAGAAG AGTCAGAATC GTTCAGGAGC CCGATGAAGA AGGAAAAACT TTCATATTCG AGATCAACGG TGAGAAAGTC TTCGCGAAGG GTGCTAACTG GATTCCCTCA GAAAACATCC TCACGTGGTT GAAAGACGAA GATTACGAAA AGCTCGTCAA AATGGCAAGG AGTGCCAATA TGAACATGCT CAGGGTCTGG GGAGGAGGAA TCTACGAGAG AGAGAGCTTC TACAGACTCT GTGATGAACT CGGTATCATG GTGTGGCAGG ATTTCATGTA CGCGTGCCTT GAATATCCGG ATCATCTTCC GTGGTTCAGA AAACTCGCGA ACGAAGAGGC AAGAAAAATT GTGAGAAAAC TCAGATACCA TCCTTCCATT GTTCTCTGGT GTGGAAACAA CGAAAACAAC TGGGGATTCG ATGAATGGGG AAATATGGCC AGAAAAGTGG ACGGTATCAA TCTCGGAAAC AGGCTCTATC TCTTCGATTT TCCAGAGATC TGTGCCGAAG AAGACCCATC CACTCCCTAT TGGCCGTCCA GTCCATACGG CGGTGAAAAG GCGAACAGCG AAAAGGAAGG AGACAGGCAC GTCTGGTATG TGTGGAGTGG CTGGATGAAC TATGAAAACT ACGAAAAAGA CACCGGAAGG TTCATCAGCG AGTTTGGATT TCAGGGTGCT CCCCATCTAG AGACGATAGA GTTCTTTTCA AAACCCGAGG AAAGGGAGAT ATTCCATCCC GTCATGCTGA AACACAACAA ACAGGTGGAA GGACAGGAAA GATTGATCAG GTTCATATTC GGGAATTTTG GGAAGTGTAA AGATTTCGAC AGTTTTGTGT ATCTGTCCCA GCTCAACCAG GCGGAGGCGA TCAAGTTCGG TGTTGAACAC TGGCGAAACA GGAAGTACAA AACGGCCGGT ACTCTCTTCT GGCAGCTCAA CGACAGCTGG CCGGTCTTCA GCTGGTCCGC AGTCGATTAC TTCAAGAGGC CCAAAGCCCT CTACTACTAT GCGAGGAGAT TCTTCGCTGA AGTTCTACCC GTTTTGAAGA GGAGAGACAG AAAAATAGAA CTGCTGGTGG TGAGCGATCT GAGGGAAACA AAAGAAGCTT CTCTCAGGCT TGCGGCCTAT GAGAAGACGG GAGAAAAAGT ATTCGAAAAG ACTTACAGAA CTGTACTCCC AGCAGACGGC GTGAGTTCTG TTGATAGAGT AGAGCTACCC GATGATCTTT TCTTCTTCGT CGAGGCAGAA GTGGATGGGG TTAGCTACAG AAACTACAGG GTTTTCAGAA AGTGGCGCGA TCTGGAACTT CCAGATCCGG AGATTTCGCT TGAGGACATG GGAGAGCTCA TAGAATTGAC AGCAAAGAGG CCAGCTTTTG GTGTCAAGAT TCTTGCCGAT GAAGTACCTG AGGACGATTT TCTGTTCCTT GAACCAGGAA GGAGTGTCAC GCTAAGGAAA CCAGCTGGAG TAAGAGGAGT GAAATCTCTG TTCGATTACC TGAGATGA
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Protein sequence | MKRIDLNGFW NVSDNEGRFS FEGTVPGVVQ ADLIREGLLP HPYVGMNEDL FKEIEDREWI YEREFEFKED VKEGERVDLV FEGVDTLSDV YLNGVYLGST EDMFIEYRFD VTNVLKEKNH LKVYIKSPIR VPKILEQNYG VLGGPEDPIR GYIRKAQYSY GWDWGARMVT SGIWKPVYLE VYKARLQDST AYLLELEGKD ALVRVNGFVY GEGNLSVEVY VNGEKIGEFP VLEKNGERLF DGVFHLEDVK LWYPWNVGEP YLYDFAFVLK DSNGEIYREE KKIGLRRVRI VQEPDEEGKT FIFEINGEKV FAKGANWIPS ENILTWLKDE DYEKLVKMAR SANMNMLRVW GGGIYERESF YRLCDELGIM VWQDFMYACL EYPDHLPWFR KLANEEARKI VRKLRYHPSI VLWCGNNENN WGFDEWGNMA RKVDGINLGN RLYLFDFPEI CAEEDPSTPY WPSSPYGGEK ANSEKEGDRH VWYVWSGWMN YENYEKDTGR FISEFGFQGA PHLETIEFFS KPEEREIFHP VMLKHNKQVE GQERLIRFIF GNFGKCKDFD SFVYLSQLNQ AEAIKFGVEH WRNRKYKTAG TLFWQLNDSW PVFSWSAVDY FKRPKALYYY ARRFFAEVLP VLKRRDRKIE LLVVSDLRET KEASLRLAAY EKTGEKVFEK TYRTVLPADG VSSVDRVELP DDLFFFVEAE VDGVSYRNYR VFRKWRDLEL PDPEISLEDM GELIELTAKR PAFGVKILAD EVPEDDFLFL EPGRSVTLRK PAGVRGVKSL FDYLR
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