Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1257 |
Symbol | |
ID | 6092698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1286467 |
End bp | 1290078 |
Gene Length | 3612 bp |
Protein Length | 1203 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642488458 |
Product | TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase |
Protein accession | YP_001739284 |
Protein GI | 170289046 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTGA AAAAATTTCT GAGAGAGACG TACTGGGGGG ATGAATTTCT CATAGAAGAT GACGGTGAAG ATCAAGTTTT GAAAATCGTA AAAGCCTCCG TGGATAGATC TTTCTTCTTC AACGAATACG CGAAATTGAA ACGGCTCAGG CTGCCAAACG TTCTTCTGCC TGAAAGGTTG AAAATCTCTG ATGGGAAGTT CCTGCTGTTC TATCCCTACT ACCACAACCT CGCACCTCTC GAAAATCTGA GCGATCAGGT CGCAAAGCAG CTTCTCAAGC TGTTTCTCTT TCTCTCGAAA GTGGGCGTCA CTATTCCCGC GCTCGGGATG GACGACATAC TGGTGAACGA CGGAGTTTTT TTGATCCCTG CACTCATCTC GAACATTCCG GACGATGTGA AGGGCGTTGT TTTTTCTCCA GAGAGATCTT CCCGGGCAAC CGAAGAAGTG TGCAGGCGTT TTTTGAAAAT CCACGGAATA GAACCTCATC TGGAGACCAG AGAGCCCTCG TTCGACTCCA GAGAGATCAG AATTCCCTAC ATTCACAGGA AAGAAGAAGA ACTGATAAAA AGAGACATAG AAACTTCCCA AAAATTTCCT CTCTTCATTC TGATCACAGG TGAACAGAGG GTGGGAAAAA CGAAACTCGC GTCTGTTCTG GTCGATGAAT TGAGAGAAAG AGGATATATG ATTCACCAGA TCTCATCTCT TGAAGATCTC CGTGTATGGT ACGATGCTTC AGACGAACTC GATCTTCTCA CCAAACTCGA CGACGGTCAA AAAAAGGTGA TCTTGATCGA CGACTTGTTT GAAGGTTCAG ACTTGTTATC GTTTCTCGAG GAGTTTTCCG GACTCTCCAC TATCACCAAA ATAATCGTTC TAACAACTTC TACAAAGGCT TTTCAATTCT TCCACAAGGT GTACAGGCTC TCTCCTTTCA CAGTTGAGGA AACTCGTATC TTTCTTGAGA GAGCGATTGG AAAAATCAGC GACGATCAAG TTAAGTTGAT TCACAGTCTC AGCAAGGGAT TACCGGGATA CATGGTAGAA TTGTTGAAAT TCTTCAACAA ATCCAATCTC AGAGAAAACA TCGTTGGAAT CTTCAAACCT CTTCTTCGAG AGCTGGATTC CGCAGAAATC AGAGAACTGA GCGTTCTGGG GCAGAAGTTC ACCGGAAGCG AATTGAGGGT TCTTGAAAAG ATAACCGGAA AAGACTACCA TGACACTTTG ATGTCCGCAT ATGATTCTGG TGTGATAACG ACAGAAGAAG GACTCTACAG ATTCGCACTT AGAGAATTCT GGAAATACTA CTACAACAAG CTTTCAGAGA ACAAAAAGAA AAATCTCCAC GAAAAACTGT TCGAAAATCT CCCGGACGAC CTCGCAATAA AACACGCCCT GTCTCTGGAG GACCCAAGAT TAAAGTTTTT CTACGTGCTG AGATACGTGA GAAAGCACTT CTGGGATTAT GAAAAGACCA GATCGCTCAT TGAATACCTG AGAAGACTGG AGGAATTTTT TGAAAAACCC TATTATTCCA TAGAAAGCTT GAAGATGAAG CTTATTTTCA GAATAGATCC TCTGGGTGTA GAAAAGGAGA ATTTTCATTT TCGCAGATTC AAAACCCTCA GAGAAATAGA TGTTGAATCG ATCTTGCAAA AAGACTCACT GTCTTATTAT GATCTATACA ATCTCGTCGT TCTTTCCCGT TTTCACATAA GAGCGGGAAA GAAAGCCCCT CAGGAAATTC TCAACACCAT CAAAAGAGAG CTCAAAGAGA AAAACTTCTC CACAAGAGAA AGGCTTTATC TGAAGGCTCA TCTTCTCTAC GATCTCTTTT CTTCAACTGA AGATCGGGAA GCACTGAAAG AGATGATGAA CATTGCCACC TCGGAAGGTT TCCTCGACCT TCAAGTGATG GGTTACAGAG CTTTGGGAGT TCTTTCAAGA ACGAGAGCGA TGAGCAACTA CTACTTCCAT CACTCTTTAG AGCTTTCAAG AAAAATAGAC CCATCACTTT CCATCGTGGA CGAAAGCAAT TTGACATGGA GCTTGCTCTA CGAGGGAAAA ATAACGAACT TCCTCGTCCA GCTTGAAAGA CTGAGAAAAC AGGCAAGGCT CTTTGAAGAC ATGCCCATCC TTTCTTACAC CTACTTTCTC GAAGGGCTCT ACTACATCCA CAAGAAAGAT TTCCAAAAAG CAGAAGAAGT CTTCAGAACA GAACTCGAAC TGGAAGAAAA ACACGGAATA GAAAGAAGAG CACTCAGAGG ACTGGTCATG AACTACCTGT TTTCTGGAGA CGTTGAATCC GCTAAAAGTC TTCTGGAAAA GGATGAACCC GAGTTCGATA GATTCGGATT CAATTTTCTC AAGAGGCTGG TCCTTGCAAA AGACGATTCA GAGCTCTTGA AAATCTGGAA AGAAAGGCTT GAAACTCCTC AGAAATTCTT CAACGAAGAA ATCGCTTATG TTTTTACAGA AAGGTTAGCA AAACTGGATC CAGAAGGCTT TGAAGATTTT CTGCTCGAAC TTGAAAGGGA AAATGTCGAA AATTCTTCAA ATCTCACACT CGCTCTGGTT TATGAAACCT TTTACAAATT CTACAGTGCC CTTGGAGAAA ACTTCAAAGC CAAGCGTTAT CTCAGAAAGG CGATTTTTGT TTACAACCTG ATAGGTTTGA GAGAAGTTTC GGTCAAGCTG GAGGTGGAAG AAAAAACTCA AATTGAAGAG AAAAAAGCAC CGTTTTATCT ATTGCTGGGT TTCATAGAAA CAGAAAAGGA ATTTTCCGAT ATGATGGAGT TTGTTGCAGC AAGGCTTTCA GAAGTAATTC CATACGAAGT TTTTTCAATT CGAATAATTG AGAGAACAAC GAAAAAGGTG ATGGAAGAAT ATTCAACATC TCCAATCACT CCACCTATGG AGAAGGACTT CCTCGAAATT TCACCCTTCA GAACGGTCAT GTCCTTCCAT CTCGATATGA AGCACGACAT GATCGTTGGT GTTGAGACCA ACCTTGAATG TGACGAAAAA ACAGCCTGGG AACTGGTGGA AACGCTCGAA CAATTTGGAA ACATTCTCAC CACCATTCTC AGAGAACGTC TCTACAGAGA CAGAAGTATG AAAGATCCTC TCACGGGAGT TCTGTCCAGG TGGTACTTCA TGGAACGTCT TGAGGAAGAG GCGTACAAAT CTTCGAGGTA TAAATCTCCC CTTTCCATCA TTATGTGCGA TGCCGATGAC TTCAAAAAGA TAAACGATCA ATTTGGACAC GTTGCGGGTG ACAAAACTCT CGGCTGGCTG GGAAGAAAGA TGAAGTCCGT TTTGAGAAAG AGCGATCTTG TGGGAAGATA CGGAGGGGAA GAGTTCATTA TAGCTCTCCC GGGAACTTCC CTGGAAGAGG CAAAGATTGT AGCAGAGAAG CTGAGAAAGG CCGTTATGGA AGATCCAGAG AACACTTATC ACATCACTCT GAGTTTTGGA GTGGCAGAAT ACAAAAACGG CGAGGACCCC TTTGAAACAA TAAAAAGGGC CGATGAGGCC CTCTACCTGG CAAAAACTCT TGGAAAGAAC TCTGTGGTCA CAGAGAAAGT ACTTTCTCGA CGATCTTCTT GA
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Protein sequence | MRVKKFLRET YWGDEFLIED DGEDQVLKIV KASVDRSFFF NEYAKLKRLR LPNVLLPERL KISDGKFLLF YPYYHNLAPL ENLSDQVAKQ LLKLFLFLSK VGVTIPALGM DDILVNDGVF LIPALISNIP DDVKGVVFSP ERSSRATEEV CRRFLKIHGI EPHLETREPS FDSREIRIPY IHRKEEELIK RDIETSQKFP LFILITGEQR VGKTKLASVL VDELRERGYM IHQISSLEDL RVWYDASDEL DLLTKLDDGQ KKVILIDDLF EGSDLLSFLE EFSGLSTITK IIVLTTSTKA FQFFHKVYRL SPFTVEETRI FLERAIGKIS DDQVKLIHSL SKGLPGYMVE LLKFFNKSNL RENIVGIFKP LLRELDSAEI RELSVLGQKF TGSELRVLEK ITGKDYHDTL MSAYDSGVIT TEEGLYRFAL REFWKYYYNK LSENKKKNLH EKLFENLPDD LAIKHALSLE DPRLKFFYVL RYVRKHFWDY EKTRSLIEYL RRLEEFFEKP YYSIESLKMK LIFRIDPLGV EKENFHFRRF KTLREIDVES ILQKDSLSYY DLYNLVVLSR FHIRAGKKAP QEILNTIKRE LKEKNFSTRE RLYLKAHLLY DLFSSTEDRE ALKEMMNIAT SEGFLDLQVM GYRALGVLSR TRAMSNYYFH HSLELSRKID PSLSIVDESN LTWSLLYEGK ITNFLVQLER LRKQARLFED MPILSYTYFL EGLYYIHKKD FQKAEEVFRT ELELEEKHGI ERRALRGLVM NYLFSGDVES AKSLLEKDEP EFDRFGFNFL KRLVLAKDDS ELLKIWKERL ETPQKFFNEE IAYVFTERLA KLDPEGFEDF LLELERENVE NSSNLTLALV YETFYKFYSA LGENFKAKRY LRKAIFVYNL IGLREVSVKL EVEEKTQIEE KKAPFYLLLG FIETEKEFSD MMEFVAARLS EVIPYEVFSI RIIERTTKKV MEEYSTSPIT PPMEKDFLEI SPFRTVMSFH LDMKHDMIVG VETNLECDEK TAWELVETLE QFGNILTTIL RERLYRDRSM KDPLTGVLSR WYFMERLEEE AYKSSRYKSP LSIIMCDADD FKKINDQFGH VAGDKTLGWL GRKMKSVLRK SDLVGRYGGE EFIIALPGTS LEEAKIVAEK LRKAVMEDPE NTYHITLSFG VAEYKNGEDP FETIKRADEA LYLAKTLGKN SVVTEKVLSR RSS
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