| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1237 |
|---|
| Symbol | |
|---|
| ID | 6092673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1265680 |
|---|
| End bp | 1266417 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642488433 |
|---|
| Product | tRNA pseudouridine synthase ACD |
|---|
| Protein accession | YP_001739264 |
|---|
| Protein GI | 170289026 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0714167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG TGGCGGCAGT GATCGAGTAC GATGGAAGTA ATTTCTTTGG ATACCAGGGG
CAACCCGATG TCAGAACGGT TCAGGGAGTT ATAGAAGACG CTCTTGAGAG GATATTCAAA
CAGAGAATCT ACACCCAGGC AGCGGGAAGA ACGGACGCTG GTGTTCATGC GAACGGTCAG
CTCATCGCTT TCAACTGTCC GAACGATCGA ATGACCACTG AGGACATAAA AAACGCCATG
AACGCGAATC TTCCAGATGA TGTTTATGTG AAAGAGGTTT TCGAGGTCTC CAAAAATTTT
CATCCCCGTT TCGATGTGAA AAAAAGAATC TATCACTACT TCATCCTGAC CTCGAAGCAG
AAGAACGTTT TCCTCAGGAA ATACGTCTGG TGGTTTCCCT ACGAGCTCGA TCTCGATGCG
ATGCGAAAAG CAGCGAAGTA TCTGGAGGGT ACCCATGACT TCACCTCTTT CAAGACGGGG
AGTGATGAAA GAGATCCTGT GCGGACCATA TACAGAATCA GAATTTTGAG GTTAAAAAAC
GATCTTGTTC TCATAAGAGT GGAGGGGAGA TCCTTTCTGA GAAGAATGGT TCGAAACATC
GTTGCCGCTC TTGTGAAAGT TGGTTTGAAG CAGTGGGAAC CTGAGAAGAT GAAGGAGGTG
CTCGAAGCAC GCGACAGGAG CGCGGCGGCT GGTACCGCAC CTGCACATGG CTTGTACTTT
TACAAAGTGC TGTTTTGA
|
|---|
| Protein sequence | MKRVAAVIEY DGSNFFGYQG QPDVRTVQGV IEDALERIFK QRIYTQAAGR TDAGVHANGQ
LIAFNCPNDR MTTEDIKNAM NANLPDDVYV KEVFEVSKNF HPRFDVKKRI YHYFILTSKQ
KNVFLRKYVW WFPYELDLDA MRKAAKYLEG THDFTSFKTG SDERDPVRTI YRIRILRLKN
DLVLIRVEGR SFLRRMVRNI VAALVKVGLK QWEPEKMKEV LEARDRSAAA GTAPAHGLYF
YKVLF
|
|---|
| |