| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1172 |
|---|
| Symbol | rpsT |
|---|
| ID | 6092607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1208886 |
|---|
| End bp | 1209176 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642488367 |
|---|
| Product | 30S ribosomal protein S20 |
|---|
| Protein accession | YP_001739199 |
|---|
| Protein GI | 170288961 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0268] Ribosomal protein S20 |
|---|
| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000300859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAATA TCAAATCTGC AAAGAAAAGG GTCAGAGTTT CTGAAAAGAG AAGACTCAGA
AACAAGGCTT ACAAGACTTT CTTCAAGAAC AGAATAAAAG AGGTTCTCAA AGCTATCGAG
AACAAAGAAC CGAAAGAAGT CGTTCTTGAA CTCACCAGGA AAGCGCAGGC TGCCATAGAC
AAAGCCGTTT CCAAGGGAGT CATCCACAAG AATCAGGGTG CGAGAAGAAA AGCGAGACTT
TTCGAGAAGG TGAACGAATA CCTGAGAACT CTCGAAACAA CTCAGGAGTG A
|
|---|
| Protein sequence | MPNIKSAKKR VRVSEKRRLR NKAYKTFFKN RIKEVLKAIE NKEPKEVVLE LTRKAQAAID
KAVSKGVIHK NQGARRKARL FEKVNEYLRT LETTQE
|
|---|
| |