| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1136 |
|---|
| Symbol | |
|---|
| ID | 6092569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1178246 |
|---|
| End bp | 1179433 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642488330 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_001739164 |
|---|
| Protein GI | 170288926 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.358682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCTCCG ATCGTGTCCT GCTGACCGAG GAAAGCCCAA TCAGAAAACT GGTTCCCTTC
GCTGAAATGG CAAAGAAGCG AGGAGTAAGG ATACACCACC TGAACATAGG ACAGCCCGAT
CTGAAAACTC CCGAGGTGTT TTTTGAGCGC ATCTACGAAA ACAAGCCGGA AGTGGTGTAC
TACTCTCACT CTGCGGGTAT CTGGGAATTG AGAGAGGCTT TCGCATCTTA CTACAAAAGA
AGACAGAGGG TAGATGTGAA ACCGGAAAAC GTTCTGGTGA CGAACGGTGG AAGCGAAGCC
ATTCTTTTTT CATTCGCTGT GATAGCAAAT CCTGGTGACG AGATCCTCGT TCTGGAACCG
TTCTACGCGA ATTACAACGC TTTCGCGAAG ATCGCCGGTG TGAAATTGAT TCCCGTAACG
AGGAGAATGG AAGAAGGATT CGCCATCCCT CAGAACCTCG AAAGTTTCAT AAACGAAAGA
ACGAGGGGAA TAGTACTTTC AAATCCCTGC AATCCGACCG GGGTGGTTTA TGGAAAAGAC
GAGATGAGAT ATCTCGTGGA AATAGCGGAA AGACACGGAC TCTTTCTGAT CGTCGACGAG
GTGTACAGCG AAATCGTGTT TCGGGGAGAA TTCGCAAGTG CCCTCAGCAT TGAAAGTGAC
AAAGTCGTAG TGATAGACAG TGTATCGAAG AAGTTCAGCG CCTGTGGGGC GAGGGTAGGA
TGTCTGATCA CGAGAAACGA AGAATTGATA TCACACGCCA TGAAACTGGC TCAGGGGAGG
CTCGCTCCAC CTCTGTTAGA ACAAATCGGA TCCGTTGGTT TGCTGAATCT CGACGATTCC
TTTTTTGATT TCGTGAGGGA AACGTACAGA GAGAGAGTCG AAACAGTATT GAAGAAACTC
GAAGAACACG GTTTGAAACG TTTCACAAAA CCCTCAGGTG CCTTCTACAT AACCGCGGAA
CTCCCCGTGG AGGACGCGGA AGAATTCGCA AGGTGGATGC TGACAGATTT CAACATGGAT
GGTGAAACAA CCATGGTCGC TCCCCTGAGG GGATTCTATT TGACTCCAGG GCTTGGAAAA
AAAGAGATAA GAATCGCGTG CGTGCTTGAG AAGGATCTCC TTTCCAGGGC CATTGACGTG
TTGATGGAAG GTTTGAAGAT GTTTTGCTCG AGCCGCATCT CCTGTTGA
|
|---|
| Protein sequence | MFSDRVLLTE ESPIRKLVPF AEMAKKRGVR IHHLNIGQPD LKTPEVFFER IYENKPEVVY
YSHSAGIWEL REAFASYYKR RQRVDVKPEN VLVTNGGSEA ILFSFAVIAN PGDEILVLEP
FYANYNAFAK IAGVKLIPVT RRMEEGFAIP QNLESFINER TRGIVLSNPC NPTGVVYGKD
EMRYLVEIAE RHGLFLIVDE VYSEIVFRGE FASALSIESD KVVVIDSVSK KFSACGARVG
CLITRNEELI SHAMKLAQGR LAPPLLEQIG SVGLLNLDDS FFDFVRETYR ERVETVLKKL
EEHGLKRFTK PSGAFYITAE LPVEDAEEFA RWMLTDFNMD GETTMVAPLR GFYLTPGLGK
KEIRIACVLE KDLLSRAIDV LMEGLKMFCS SRISC
|
|---|
| |