| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1135 |
|---|
| Symbol | |
|---|
| ID | 6092568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1176564 |
|---|
| End bp | 1178207 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642488329 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001739163 |
|---|
| Protein GI | 170288925 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGAAA AAATGGAAAA ACTCATCAAT CTCCTCGAGA TTTCTCTGGT TGTTCTCCTT
TCCAGCTTCT CTTTTTTAGA AATTCTCAAA GGCAACTTAC TGTCCCTTGC CTACCCCTGC
CTCGTTTTCG CCGTGTTTCT TTCCCTGTTT AGGCGAAGAT GGTACAGAAA TTTGAAGAAT
GAGATGAACG AGAAGAGTGA AGAGATGTCT GCAATGAATC AAGAACTCAC AGCGTTAAAC
CAGCAACTCA CAGCCGTGAA TCAGGAGCTG GAAGCCTCTT ACGAAAGCCT TCAGATCCTC
TCCACCCAGC TGGCCAGAAT CATGGAAACC ATGGGAGAAA TGGATCTTGA GGTCGATCCT
GTTCCTACTC TTGAAAGGAT TTTTTACGAT GTGAAGAAAC TGGTAGAACC GCTGTCGGGA
CTCGAGTTGA AAAACTCACA GAGATCCATT GCTGTTGGTG AATTCACAGA AAATCTGCTC
TACAAAGAAG CCGGAAAGAC ATCCGCCAAG ATCTTTGTAA GCAGAGAACT CGAAAGGGAT
GAAGAAATGT TCCTGAACTC CGTTCTGAAT TTTTCCCTCT TTCTTCTGAA CGCCCACGAT
TCGTATCTTG AGGTTATGAA GAACAGAGAC ACGCTCTCAA GGATGATCAG CTCTCTGGAA
GAGGTTTTAG GTGTTTCAAG AAGAACAGAA CTCATAGAGA AGATACTACA CTATTTGAAA
GACATGTTCC CCGGCATCGT GCTGTCGTCC GTTTCTCTTC TCGAAGATGG AAAAATAAAA
ACCTTCTTTC TGAAAAACGG CCAGATCGAG GTGGTCAATC TCAAAAGAGG TATCGTGGTA
AAGGCTTTTG AAACAAAGAA AGATCTTTTC GTGAACGATG TGAGGGACTT CCCAGAATTT
TACGATGTCA CGAATGGAAG AACAAGATCC GCGGCCGCCA TCTTCTTCGA GTACGAAAAC
ACTCCCCTCG TCCTCGAAAT TGAAAAGGAT TCGGAAATCA CTGAATACGA ACTCTCATCC
CTCAAAATGA TGGCGAGAAT CCTGGCGATC TTCTTCTCAC GTTTGAGCCT CTACAGGAAA
CTCCGAAAAA CCTTTTTCCA AACAATAGAA GCGTTCTCGT ACGCGGTGGA GTTAAAAGAT
CCCTACACCA GCGGACACAG CCTGAGAGTC GCTGATTATT CACAGGAAAT AGCCAGAAGA
ATGGGTCTTC CAGATCAGGT GGTGGAGAGA ATCAGGATAG CCGCTGTTCT CCACGATATA
GGAAAGATAG GTGTCAAAGG TGCCATTCTC AACAAAACCT CTAAGCTCAC AAAAGAAGAA
TACGAAGAAG TGAAGAAGCA TCCAGAACTC GGTGAAAAAC TGATCAGCAA AATCGAAGAC
TTCTCCGATA TAGCGAAGAT AGTGAGACAC CATCACGAAT GGTACAGCGG TCAGGGATAC
CCGGATGGAC TTCGCGGGGA AGAAATACCG TTGGAATCGA GGATCATCGC CATAGCTGAC
GCATTCGATG CGATGACCAG CGACAGACCG TACAGAAAAG CCATGGATAG AAAAACAGCC
CTCGAAATTC TTCGCAGAAA CGAGGGATCC CAGTGGGATC CTGAAATTCT GAAGATCGCC
TTAGACTACT TCAGCGGACT CTGA
|
|---|
| Protein sequence | MTEKMEKLIN LLEISLVVLL SSFSFLEILK GNLLSLAYPC LVFAVFLSLF RRRWYRNLKN
EMNEKSEEMS AMNQELTALN QQLTAVNQEL EASYESLQIL STQLARIMET MGEMDLEVDP
VPTLERIFYD VKKLVEPLSG LELKNSQRSI AVGEFTENLL YKEAGKTSAK IFVSRELERD
EEMFLNSVLN FSLFLLNAHD SYLEVMKNRD TLSRMISSLE EVLGVSRRTE LIEKILHYLK
DMFPGIVLSS VSLLEDGKIK TFFLKNGQIE VVNLKRGIVV KAFETKKDLF VNDVRDFPEF
YDVTNGRTRS AAAIFFEYEN TPLVLEIEKD SEITEYELSS LKMMARILAI FFSRLSLYRK
LRKTFFQTIE AFSYAVELKD PYTSGHSLRV ADYSQEIARR MGLPDQVVER IRIAAVLHDI
GKIGVKGAIL NKTSKLTKEE YEEVKKHPEL GEKLISKIED FSDIAKIVRH HHEWYSGQGY
PDGLRGEEIP LESRIIAIAD AFDAMTSDRP YRKAMDRKTA LEILRRNEGS QWDPEILKIA
LDYFSGL
|
|---|
| |