Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1094 |
Symbol | |
ID | 6092527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1138314 |
End bp | 1139003 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642488289 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001739123 |
Protein GI | 170288885 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.952967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTGA AAGAAAACCT CGAAAGGGTT CTCAACAGAA TGAAAAACGC TGCTCTTCGA GCAAACAGGG ATCCCTTCGA AGTGAGGCTC GTAGTCGCTT CAAAATACGC CAGCGTCCAG CAGATGGAAG AACTCGTGTT CCTTGGTATC AGAGAGTTCG GAGAAAACAG AGCGCAGGAT CTCGTCAAAA AGAGCGAATA TTTCAAGGGC AAACCCATCA TCTGGCACTT CATTGGAAGA ATACAGACGA ACAAGGTGAA ATACATCGTA CCGAGATGTG AACTGATCCA CTCCGTCTGG AGGGAAGAGG AGCTGAAAGA AATAGAAAAA AGGGCAGAAA AACTTGGGAA AATCCAGAAG ATTCTCCTTG AGGTGAACGT CTTCAAAGAA GAAACGAAGG CCGGGCTTCT GGTCGAAGAA GTGGAAGAGT TCTTGAAACT CTGTCAGGAA TTCCCACACG TCGAAGTTCT CGGCTTTATG ACCATGGCTC CCTACGCTGA AAACCCCGAA GAAGTTCGGT GGGGTTTCAG AACTCTCAGA GAGCTAAGGG ACGAGCTCGC CAGCAGGTTC AACGGGAACG TGAAACTCAA GGAGCTTTCC ATGGGCATGA GCAACGATTT CGAAGTAGCG ATAGAAGAAG GAGCAACCAT GGTGAGGATT GGAAGCGCCA TATTCGAAGG AGGGAAGTGA
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Protein sequence | MGLKENLERV LNRMKNAALR ANRDPFEVRL VVASKYASVQ QMEELVFLGI REFGENRAQD LVKKSEYFKG KPIIWHFIGR IQTNKVKYIV PRCELIHSVW REEELKEIEK RAEKLGKIQK ILLEVNVFKE ETKAGLLVEE VEEFLKLCQE FPHVEVLGFM TMAPYAENPE EVRWGFRTLR ELRDELASRF NGNVKLKELS MGMSNDFEVA IEEGATMVRI GSAIFEGGK
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