Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1018 |
Symbol | |
ID | 6092448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1064228 |
End bp | 1065865 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642488214 |
Product | CRISPR-associated Csh1 family protein |
Protein accession | YP_001739051 |
Protein GI | 170288813 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02556] CRISPR-associated protein, TM1802 family [TIGR02591] CRISPR-associated protein, Csh1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGAGA AGATATACAA TCTTGGGAAA ATCGGAATCG AATCTCTCTC AGATTTCGCC GAAGAACTTC CTCTTGAAGA CGGACTGGCT ATTTTTCTCG AAAGTGGTCC AAATGGTTTG ATTTTCAAAG ATATTGGTCC CGTTAAGAAA AGCCCTGGTG GAAAGAGTTC GAAGGTTTTC CTCTACAGAA AACAGCGCGG GAATTTCTCT TCTTCTGTTT CCCCCACCAT GAAATTCCTC GACGAATCTA GTGTTTCGAG AGACCCTCTG GAAAGGACCT TTGATGTCTT CTTAGGCTTT TTCGACCATC CGAAGATATC TCACATCAAA GATGTCCTTG AGAGAAATAA AGAAAAGATT ATTGAAAAGC TAAGAAATTA CGATTTAAAA AACAGATTTC TCACGATATC CATCGATGGA AAATTTCCCG CAGAAGTTCC AGAAATTCTC CGGGCGTTTG AAGATAAAGT CACACAGAAG AAAACTAAGG GAGAGGCGAA ATGTTTCCTG TGTGGAAAAG AAGCAAATTC CAGACTGAGT GATGTGTTCA AATTTGCCAC CTTTGACAAG CCTGGCTTCA CACCTTTTCT CTCCAGGAAA CACCCGATCC AGATTTGTGG TGAGTGCAGG AGTGTTTTGG AAAAAGCCAG AAGAGTAATT GATGAAAAGC TTTCTTTCTC CTTCTTCAAC AACAGAATTC TCTGGATAAT TCCCTCCGTG CCCAATCAGG ATATTCTGGA ATCAGTGATT GAAAAAATAT CTGAAATAAA AGACACCGAC AAAAAATCAA AGCTTCGCAG TTTTGCTAGA CTCGAAAGAA AAATAGAAGA TGTTCTCTCC GAAAATGAGA AAGCTGTCTA CGATTTCATA CTGATAGAAA AGGAACAGCA GGCGGAAAGA ATAGTTCTGC ACATAGAGGA GGTTTCACCT ACAAGAGTGA GACAAATCCT CGATGAGTCA GATAAAACAG AATCTCAACT CAAGGAAGAT GGCTTCGAAA TTTCTGTGAA CTTCTCGGTG ATACACAAAT TCTTCGAGGA TCTGGACAGA TACTTCAACT CCCTGTTCAG TGCTGTGTTC TCTGAGGGGA CGTTTGATAA AAAACTGCTG CTGACTCTCT TTCTTTCGAA AATAAGAAGC GATTTCTTTG GAAATGATAC TTTACTTTCT GCACGTGAGG CTTTCGCCAC GTACGTTTAT CTGAGACGTT TGAACGTCTT AAAGGGGGGT GCTTCCGTTT TGAAGGGTGA AGATTTCTTC TCAAGGTATC CGGAGTTTTT CGATGAACCA TGGAAGAAGG CAGTCTTCTT AGAAGGAGTT CTGGCAAATT ACCTTCTTTA CCTGCAGTAC GTTAAAAGAA ACTCGAAGGC TTTCACGAAG AAACTGAAAG GACTCAGACT GACAAAGAGA GATGTGGAGG GGCTTCTCCC AGAAATCAGA GCCAAGATCG AAGCCTACGG TGGAATGAGT GAAAGTGTGG CAGAGCTTTT CAGGGAGGCT ACTGAAGCCT TTCTCGAAGC TGGAAACTGG TCAGCATCGC CCGATGAGAT CAGTTTTGTC TTTGTTTCGG GACTTTCCCT CGGGAAAACT TTCTTCAAGG AGGTAGAGGT TGATGAATCC GGTGAAAAAC AGGAGTGA
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Protein sequence | MLEKIYNLGK IGIESLSDFA EELPLEDGLA IFLESGPNGL IFKDIGPVKK SPGGKSSKVF LYRKQRGNFS SSVSPTMKFL DESSVSRDPL ERTFDVFLGF FDHPKISHIK DVLERNKEKI IEKLRNYDLK NRFLTISIDG KFPAEVPEIL RAFEDKVTQK KTKGEAKCFL CGKEANSRLS DVFKFATFDK PGFTPFLSRK HPIQICGECR SVLEKARRVI DEKLSFSFFN NRILWIIPSV PNQDILESVI EKISEIKDTD KKSKLRSFAR LERKIEDVLS ENEKAVYDFI LIEKEQQAER IVLHIEEVSP TRVRQILDES DKTESQLKED GFEISVNFSV IHKFFEDLDR YFNSLFSAVF SEGTFDKKLL LTLFLSKIRS DFFGNDTLLS AREAFATYVY LRRLNVLKGG ASVLKGEDFF SRYPEFFDEP WKKAVFLEGV LANYLLYLQY VKRNSKAFTK KLKGLRLTKR DVEGLLPEIR AKIEAYGGMS ESVAELFREA TEAFLEAGNW SASPDEISFV FVSGLSLGKT FFKEVEVDES GEKQE
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