| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0993 |
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| Symbol | |
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| ID | 6092423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1038606 |
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| End bp | 1039652 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642488189 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001739026 |
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| Protein GI | 170288788 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGAAA CTTTCATGAA AAGAGCGATA GAGCTTGCAA AGAAAGGACT TGGAAGGGTG
AATCCCAACC CACCAGTTGG TGCGGTCGTT GTGAAAGACG GCAGGATAAT CGCGGAGGGT
TTTCATCCCT ATTTTGGAGG TCCGCACGCT GAAAGGATGG CAATAGAAAG TGCAAGAAAG
AAAGGAGAAG ATTTACGAGG TGCAACTCTC ATAGTTACCC TTGAACCCTG TGATCATCAT
GGAAAGACAC CTCCATGCAC GGATCTGATC ATAGAAAGTG GAATAAAAAC CGTTGTGATT
GGAACAAGGG ATCCAAATCC TGTTTCGGGA AACGGTGTGG AAAAATTCAG AAATCACGGT
ATTGAAGTGA TAGAAGGTGT TTTGGAAGAA GAGGTGAAAA AGCTGTGTGA GTTTTTCATC
ACTTATGTGA CAAAGAAAAG GCCGTTCGTT GCGCTGAAGT ACGCGTCCAC CTTAGATGGG
AAAATAGCTG ATCACAGAGG AGATTCCAAG TGGATCACAG ACAAACTCAG ATTCAAGGTT
CACGAGATGA GAAACATCTA CTCTGCTGTT CTCGTCGGTG CTGGAACGGT TTTGAAGGAC
GATCCCCAGC TAACCTGCAG ACTGAAAGAA GGCAGAAATC CTGTGAGGGT GATCCTCGAC
AGAAAGGGTG TTTTGAGTGG GAAAGTGTTC AGAGTGTTCG AAGAAAACGC TCGGGTGATC
GTTTTCACAG AAAGTGAAGA GGCGGAATAT CCACCACACG TGGAGAAGGC CCTGAGCGAT
TGTTCTGTGG AGAGTATATT GAGAAATCTG TATGAAAGGG ATATCGATTC TGTCTTGGTG
GAGGGTGGAT CGAAGGTGTT CAGCGAATTT TTGGATCACG CAGATGTGGT TTTTGGTTTT
TATTCGACGA AGATTTTCGG AAAGGGGCTT GATGTCTTCT CCGGTTATCT GTCAGATGTT
TCGGTTCCTC CGAAGTTCAA AGTGGTGAAC GTGGAGTTTT CCGATTCGGA GTTTCTGGTG
GAGATGAGAA CGTGTTCACG GGAATAG
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| Protein sequence | MYETFMKRAI ELAKKGLGRV NPNPPVGAVV VKDGRIIAEG FHPYFGGPHA ERMAIESARK
KGEDLRGATL IVTLEPCDHH GKTPPCTDLI IESGIKTVVI GTRDPNPVSG NGVEKFRNHG
IEVIEGVLEE EVKKLCEFFI TYVTKKRPFV ALKYASTLDG KIADHRGDSK WITDKLRFKV
HEMRNIYSAV LVGAGTVLKD DPQLTCRLKE GRNPVRVILD RKGVLSGKVF RVFEENARVI
VFTESEEAEY PPHVEKALSD CSVESILRNL YERDIDSVLV EGGSKVFSEF LDHADVVFGF
YSTKIFGKGL DVFSGYLSDV SVPPKFKVVN VEFSDSEFLV EMRTCSRE
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