Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0983 |
Symbol | |
ID | 6092413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1025284 |
End bp | 1026951 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642488179 |
Product | alpha amylase catalytic region |
Protein accession | YP_001739016 |
Protein GI | 170288778 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000965574 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAAGA CTTTTTTACT GCTTGCTCTG GTATTTTTAC TCTTCCTCAC CTCCTGCTTT CAAACGTCTA TGAGTCAATC CCTCGTTTCA AGTAATCCAC ATTCAAACAG CACAAACACA GGTGATTCAG CCTCCAACCT TTCTATTAAT GAAGTAAAAT ACCCCGTCGT CTACGAAATT TTCATTCGCT CCTTTTACGA CAGCGACGGA GATGGTGTGG GAGACATAAA CGGTGTTTCT CAGAAAGTTG ACTATCTGAG GAAACTCGGC ATTGACGCTG TGTGGTTTAT GCCCTTCAAC GAGGCTGTTT CATACCATGG ATACGACATA ACAGACTACT ACAACGTCGA GAAAGACTAC GGCACCATGG AAGATCTCGA AAACATGATC CAGGTGCTCC ATGAGAACGG AATAAAGGTA ATAATGGATC TCGTGATCAA CCACACATCC GATGAGCATC CCTGGTTCAA AGACGCCGTG GAAAACACGA CCAGCTCTCC GTACTGGGAC TACTACATAA TGAGTCTTGA AGATCATTCT GGTCAGGGTC ACTGGCACTG GAAGATCAAC TCAAAGGGTC AAAAAGTCTG GTATTTCGGA CTTTTTGGCT ATAACATGCC GGATCTGAAC CACGACAGTC AGAAAGTGAG AGAAGAAGTA AAGAAAATCG TGGATTTCTG GATTTCCAAA GGTGTTGATG GATTCAGAAT AGATGCTGCA AAGCACATAT ATGGCTGGTC CTGGGACGAT GGGATACAGG AGTCGGCCGA ATATTTTGAA TGGTTCAGAG ATTATGTGCT TTCCAAAAAG CCCGATGCCA TACTTGTGGG AGAGGTGTTC AGCGGAAACA CGTACGATCT TTCTCTATAT CCAATTCCCG TTTTCAATTT CGCCCTCATG TACAGTATAA GGAACTACCC AGAAGGGCAG GATGGAATGA TAGAAAACAA CTGGGTTGAG GAGTCTTTCC TGTTTCTTGA GAATCACGAT CTCCACAGGT TCTTCTCCCA TCTTCAAGAA CATTACAAAA AGTTCTCCGA GTCCGACTAC GAATTCATCA AAAAACGTGC TGCTCTCTGG TATTTTCTGA TATTCACACT GAAAGGATCT CCTGTTATCT ACTACGGCGG TGAAATTGGA ACGAGAGGTT TCAAGTGGCA CGGTCCTGTA TATGACGAGC CGGTGAGAGA GCCGATGCAG TGGTACGCAA GCGGTACAGG AGAAGGTCAA ACCTTCTGGA CAAAGGAAGT CTACAAAAAC GCGGGGATAA CCTTTGGAAA CGCTGATGTT GACGGATGTA TCTATGACGA TCCTTACGAT GGCTTCTCCG TCGAAGAACA GGAAAACGAT CCGAAGAGTC TTTTGAATTT CATCAGATTC ATTCTCAACT TCAGAAAAGA TCACGACGCC ATTTTGAATG GAGATCAAAC GATCTTCAGG GACTGGAAAA ACCTCATAGC GTTCTACAGA GAATCCTCCA ACGAAAAGCT GTTGGTGGTC TTGAATCCGG ATCCAGTCTG GCAAAACAGC TTCACTTTTG AAGAAAACAT GACGATGATT CTCGAGGTAG ATTTTGAAAA CTTCATCTGG AACGAGTCAA ACGTGTCTTT TTCAGCGGGT GAATCCTTCA CTGTGGATCC CATGAAAGCG TACATTTTCA AAAAGTGA
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Protein sequence | MKKTFLLLAL VFLLFLTSCF QTSMSQSLVS SNPHSNSTNT GDSASNLSIN EVKYPVVYEI FIRSFYDSDG DGVGDINGVS QKVDYLRKLG IDAVWFMPFN EAVSYHGYDI TDYYNVEKDY GTMEDLENMI QVLHENGIKV IMDLVINHTS DEHPWFKDAV ENTTSSPYWD YYIMSLEDHS GQGHWHWKIN SKGQKVWYFG LFGYNMPDLN HDSQKVREEV KKIVDFWISK GVDGFRIDAA KHIYGWSWDD GIQESAEYFE WFRDYVLSKK PDAILVGEVF SGNTYDLSLY PIPVFNFALM YSIRNYPEGQ DGMIENNWVE ESFLFLENHD LHRFFSHLQE HYKKFSESDY EFIKKRAALW YFLIFTLKGS PVIYYGGEIG TRGFKWHGPV YDEPVREPMQ WYASGTGEGQ TFWTKEVYKN AGITFGNADV DGCIYDDPYD GFSVEEQEND PKSLLNFIRF ILNFRKDHDA ILNGDQTIFR DWKNLIAFYR ESSNEKLLVV LNPDPVWQNS FTFEENMTMI LEVDFENFIW NESNVSFSAG ESFTVDPMKA YIFKK
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