| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0962 |
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| Symbol | |
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| ID | 6092392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 995806 |
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| End bp | 997329 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642488159 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001738996 |
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| Protein GI | 170288758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0148724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTGGT ACATAGTAGC AGGAGCCGGT GGTCTTCTGA TTGGATATTT AATAGCAAAC
TATCAGATAA ATCAAAAGCT CAGAAAAGCG AAAGAAGACG CTCAAACCAT CATTGAAAAG
GCGGAGAAAG AAGCAAACGA GATAAAAAAG AAAGCGATAA TAGAAGGAAG AGAGGAAGTT
CACAGGCTCA GAGAAGAATT CGAAAAAGAG CGATCCAGAA GAGAAGAGGA ATTGAGAGCA
TTAGAAGAAA GACTCTTGAA AAGAGAAGAG CTCCTGACAA GAAAAGAAGA GAACCTTGAG
AAAAGGGAAC AGCAGGTTGA AGAACTCAAA GCAAATCTGG AAGAGAAAAT GAGAGAGGTC
GAAGAAAAGG AAAAAAGAAT CGACGAAGAA TTGAAACGCC TTGCCGGTAT GACTGTAGAA
GAGGCAAGAG AACTCATCCT CGAAGAAGCA AGGCAGAGGT ACGAACACGA CCTTGCGAAA
CTCTACAAAG AGATGAAAGA ACAGGTTGAA GAAGAAGCTG AGAAGGAAGC CAAGAAAGTC
ATAGCATTCG CTGTTCAGAG ATACGCACCG GATTATGTAG GAGAAATCAC CGTTTCTACC
GTTTCTCTAC CGTCGGATGA CATGAAGGGA AGAATCATAG GTAGAGAAGG AAGAAACATC
AGGACATTTG AAAAGATCAC GGGTGTGGAC TTGATAATAG ACGACACCCC GGAAGTGGTG
GTTCTTTCCT GCTTTAACCC TCTGAGAAGA GAGATAGCCC GTATCACTCT GGAAAAACTG
GTGGCGGATG GAAGAATACA TCCTGCAAGG ATCGAAGAAA TGTACGAAAA AGCAAAGCAG
GAAGTGGAGA AAGCCATAAA AGAAGCTGGA CAGGAGGCGA CGTTCAAAGC GGGTGTTATG
GGGCTCCATC CGGAGCTTGT GAAACTCCTT GGAAAATTGA AATACAGAAC GAGCTATGGC
CAAAACGTTC TGAACCATTC GATAGAAGTG GCTCTGCTCG CCGGTTACAT GGCTTCTGAA
CTTGGGCTAA ACGCGGACAA AGCGAGAAGA GGAGGACTCC TCCACGATAT AGGAAAAGCT
GTTGATCAGG AGCTGGAAGG TTCACACACG ACCATAGGTG CAGAGCTTGC CCGAAGATAC
GGAGAAAAAG AAGACATCAT AAACATGATT CTCAGCCATC ACGGAGAAGA AGAACCCATG
ACACCTGAAG CAGTACTCGT GGCAGCTGCT GATGCTCTCT CCGCGGCAAG ACCAGGTGCG
AGAAGAGAGA GTCTGGAGAA CTACATCAAG CGTCTTATGA AGCTGGAGGA GATAGCAAAA
AGCTTCAAGT ACGTTGAAAA GGCCTACGCC ATTCAGGCTG GAAGAGAAAT TAGAGTGATT
GTGGAACCCG ACAAAGTGGA TGACGCTCTC GCTGAAAAAC TCGCCTACGA TATTTCTAAA
AAGATAGAAG AAGAGCTCGA GTATCCTGGT GTTCTGAAAG TTGTGGTGAT AAGAGAGAAA
AGAAGCGTCG CTTACGCGAA GTAA
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| Protein sequence | MLWYIVAGAG GLLIGYLIAN YQINQKLRKA KEDAQTIIEK AEKEANEIKK KAIIEGREEV
HRLREEFEKE RSRREEELRA LEERLLKREE LLTRKEENLE KREQQVEELK ANLEEKMREV
EEKEKRIDEE LKRLAGMTVE EARELILEEA RQRYEHDLAK LYKEMKEQVE EEAEKEAKKV
IAFAVQRYAP DYVGEITVST VSLPSDDMKG RIIGREGRNI RTFEKITGVD LIIDDTPEVV
VLSCFNPLRR EIARITLEKL VADGRIHPAR IEEMYEKAKQ EVEKAIKEAG QEATFKAGVM
GLHPELVKLL GKLKYRTSYG QNVLNHSIEV ALLAGYMASE LGLNADKARR GGLLHDIGKA
VDQELEGSHT TIGAELARRY GEKEDIINMI LSHHGEEEPM TPEAVLVAAA DALSAARPGA
RRESLENYIK RLMKLEEIAK SFKYVEKAYA IQAGREIRVI VEPDKVDDAL AEKLAYDISK
KIEEELEYPG VLKVVVIREK RSVAYAK
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