Gene TRQ2_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0946 
Symbol 
ID6092376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp982003 
End bp983169 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content47% 
IMG OID642488143 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_001738980 
Protein GI170288742 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000933718 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAAT ACTGGATTAG AAGAGCCCTT GAAGTAGTGA AAACGCCTTT TCTTCTTTTC 
GATCTGTCGG TCGTGGAAAA GAAATATCTG GAGATGAAAG CTGCTCTCAA AAAAGCGGAT
ATTTACTACG CTGTGAAGGC AAACTCCCAC CCGCGTATTA TATCCCTTCT TGCCAGGTTG
GGGAGTAATT TCGATGTGGC TTCCAAGGGG GAGATAGAAA AGCTCCTCGC ACTTGGTGTG
GATGGGAAGA GAATGAGTTT TGGTAACACC ATAAAAAGAG AGGAAGACAT CGCGTTCGCG
TACAAAAACG GTATAAGGCT CTTTGCAGTG GATAGTGAGA TGGAAGTGGA AAAAGTCGCT
ATAAATGCTC CTGGAAGCTT CGTTTTTGTG AGAGTGGAAA CGGATGGTGC AGACGCAGAC
TGGCCCCTTT CCAGAAAGTT TGGAACCAAT CCAGAGCATG CTCTTCAGCT TCTCTCCTAT
GCTTCGAAGA TGAAACTGAT CCCCGCGGGA TTGAGTTTTC ACGTGGGATC TCAGAATTTG
AATCCTGAAA GCTGGAAAAA AGCGATAGAG ATCGCGGGGA GAGTGTTCAA AAAAGCCATG
AGATCCGGTT TAAACCTTTT CCTCTTGAAC GTTGGTGGAG GCTTTCCTGT TCAGCACACA
AAGCCAATTC CGAGTATGGA AGAAATAGGA AAGGCAATCG AAGAGGCGAT AGACGAAAAC
CTCTGGTTTG TCCACAATTT GAGAGTGATA GCCGAGCCTG GAAGGTACAT GGTTGGAGAA
GCGGGCTGGC TTGTTACAAA GGTGCTTTTG AAGAGCGAAA GATCCGGTGA AAAATGGGTG
TACATAGACG CGGGAGTGTT TCACGGGCTC GCGGAAACTA TCCAAAACTT CGAGTACGAA
GTCAGAGTCC TTGGAAAAGA AAGAGAAGAG CTCGAAGAGT ACCATCTGGC GGGTCCCACC
TGCGACAGCG TCGATGTGAT ATACGACAGA ATCTTACTTC CAAAGAGCAT CACCTTGAAC
GACCTTGTGT GTTTCATAAA CGCGGGGGCT TACACGGTGG AGTACAACAC CCGTTTCAAC
GGAATAGAAC CACCGAAAAT GGTTTTCATC GAAGAACTCA CGGAGATCTC AATAGAGGAG
AAAATCAAAA CACGAGTGCT GGATTGA
 
Protein sequence
MMEYWIRRAL EVVKTPFLLF DLSVVEKKYL EMKAALKKAD IYYAVKANSH PRIISLLARL 
GSNFDVASKG EIEKLLALGV DGKRMSFGNT IKREEDIAFA YKNGIRLFAV DSEMEVEKVA
INAPGSFVFV RVETDGADAD WPLSRKFGTN PEHALQLLSY ASKMKLIPAG LSFHVGSQNL
NPESWKKAIE IAGRVFKKAM RSGLNLFLLN VGGGFPVQHT KPIPSMEEIG KAIEEAIDEN
LWFVHNLRVI AEPGRYMVGE AGWLVTKVLL KSERSGEKWV YIDAGVFHGL AETIQNFEYE
VRVLGKEREE LEEYHLAGPT CDSVDVIYDR ILLPKSITLN DLVCFINAGA YTVEYNTRFN
GIEPPKMVFI EELTEISIEE KIKTRVLD