Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0920 |
Symbol | |
ID | 6092350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 952018 |
End bp | 954183 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642488117 |
Product | glycoside hydrolase family 3 protein |
Protein accession | YP_001738954 |
Protein GI | 170288716 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGGA TCGATGAAAT CCTCTCTCAG TTAACTACAG AGGAAAAGGT GAAGCTCGTT GTGGGGGTCG GTCTTCCAGG ACTTTTTGGA AACCCACATT CCAGAGTGGC GGGTGCGGCT GGAGAAACAC ATCCCATTCC AAGACTTGGA ATTCCTGCGT TTGTCCTGGC AGATGGTCCC GCAGGACTCA GAATAAATCC AACAAGGGAA AACGATGAAA ACACTTACTA CACGACGGCA TTTCCCGTTG AAATCATGCT TGCTTCTACC TGGAACAGAG ACCTTCTGGA AGAAGTGGGA AAAGCCATGG GAGAAGAAGT TAGGGAATAC GGTGTCGATG TGCTTCTTGC ACCTGCGATG AACATTCACA GAAACCCTCT TTGTGGAAGG AATTTCGAGT ACTACTCAGA AGATCCTGTC CTTTCCGGTG AAATGGCTTC AGCCTTTGTC AAGGGAGTTC AATCTCAAGG GGTGGGAGCC TGCATAAAAC ACTTTGTCGC GAACAACCAG GAAACGAACA GGATGGTAGT GGACACGATC GTGTCCGAGC GAGCCCTCAG AGAAATATAT CTGAAAGGTT TTGAAATTGC CGTCAAGAAA GCAAGACCCT GGACCGTGAT GAGCGCTTAC AACAAACTGA ATGGAAAATA CTGTTCACAG AACGAATGGC TTTTGAAGAA GGTTCTCAGG GAAGAATGGG GATTTGACGG TTTCGTGATG AGCGACTGGT ACGCGGGAGA CAACCCTGTA GAACAGCTCA AGGCCGGAAA CGATATGATC ATGCCTGGAA AAGCGTATCA GGTGAACACG GAAAGAAGAG ATGAAATAGA AGAAATCATG GAGGCGTTGA AGGAGGGAAA GTTGAGTGAG GAGGTTCTCG ATGAGTGTGT GAGAAACATT CTCAAAGTTC TTGTGAACGC GCCTTCCTTC AAAGGGTACA GGTACTCAAA CAAACCGGAT CTCGAATCTC ACGCGGAAGT CGCCTACAAA GCAGGTGCGG AGGGTGTTGT CCTTCTTGAG AACAACGGTG TTCTTCCGTT CGATGAAAAT ACCCATGTCG CCGTCTTTGG CACCGGTCAA ATCGAAACAA TAAAGGGAGG AACGGGAAGT GGAGACACCC ATCCGAGATA CACGATCTCT ATCCTTGAAG GCATAAAAGA AAGAAACATG AAGTTCGACG AAGAACTCGC TTCCACTTAT GAGGAGTACA TAAAAAAGAT GAGAGAAACA GAGGAATATA AACCCAGAAC CGACTCCTGG GGAACGGCCA TAAAACCGAA ACTTCCAGAG AACTTCCTCC CAGAAAAAGA GATAAAGAAA GCTGCAAAGA AAAACGATGT TGCAGTTGTT GTGATCAGCA GGATCTCCGG TGAGGGATAC GACAGAAAGC CGGTGAAAGG TGATTTCTAC CTCTCCGATG ACGAGCTGGA ACTCATAAAA ACCGTCTCGA AAGAATTCCA CGATCAGGGT AAGAAAGTTG TGGTTCTTCT GAACATCGGA AGTCCCATCG AAGTCGCAAG CTGGAGAGAC CTTGTGGATG GAATTCTTCT TGTCTGGCAG GCGGGACAGG AGATGGGAAG AATAGTGGCC GATGTTCTTG TGGGAAAGAT TAATCCCTCC GGAAAACTTC CAACGACCTT CCCGAAGGAT TACTCGGACG TTCCATCCTG GACGTTCCCA GGAGAGCCAA AGGACAATCC GCAAAGAGTG GTGTACGAGG AAGACATCTA CGTGGGATAC AGGTACTACG ACACCTTTGG TGTGGAACCT GCCTACGAGT TCGGCTACGG CCTCTCTTAC ACAAAGTTTG AATACAAAGA TTTAAAGATC GCTATCGACG GAGATATACT CAGAGTGTCG TACACGATCA CAAACACCGG GGACAGAGCT GGAAAGGAAG TCTCACAGGT TTATGTCAAA GCTCCAAAAG GGAAAATAGA CAAACCCTTC CAGGAGCTGA AAGCGTTCCA CAAAACAAAA CTTTTGAACC CGGGTGAATC CGAAAAGATC TTTCTGGAAA TTCCTCTTAG AGATCTTGCG AGTTTCGATG GGAAAGAATG GGTTGTCGAG TCAGGAGAAT ACGAGGTCAG GGTCGGTGCA TCTTCGAGGG ATATAAGGTT GAGAGATATT TTTCTGGTTG AGGGAGAGAA GAGATTCAAA CCATGA
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Protein sequence | MERIDEILSQ LTTEEKVKLV VGVGLPGLFG NPHSRVAGAA GETHPIPRLG IPAFVLADGP AGLRINPTRE NDENTYYTTA FPVEIMLAST WNRDLLEEVG KAMGEEVREY GVDVLLAPAM NIHRNPLCGR NFEYYSEDPV LSGEMASAFV KGVQSQGVGA CIKHFVANNQ ETNRMVVDTI VSERALREIY LKGFEIAVKK ARPWTVMSAY NKLNGKYCSQ NEWLLKKVLR EEWGFDGFVM SDWYAGDNPV EQLKAGNDMI MPGKAYQVNT ERRDEIEEIM EALKEGKLSE EVLDECVRNI LKVLVNAPSF KGYRYSNKPD LESHAEVAYK AGAEGVVLLE NNGVLPFDEN THVAVFGTGQ IETIKGGTGS GDTHPRYTIS ILEGIKERNM KFDEELASTY EEYIKKMRET EEYKPRTDSW GTAIKPKLPE NFLPEKEIKK AAKKNDVAVV VISRISGEGY DRKPVKGDFY LSDDELELIK TVSKEFHDQG KKVVVLLNIG SPIEVASWRD LVDGILLVWQ AGQEMGRIVA DVLVGKINPS GKLPTTFPKD YSDVPSWTFP GEPKDNPQRV VYEEDIYVGY RYYDTFGVEP AYEFGYGLSY TKFEYKDLKI AIDGDILRVS YTITNTGDRA GKEVSQVYVK APKGKIDKPF QELKAFHKTK LLNPGESEKI FLEIPLRDLA SFDGKEWVVE SGEYEVRVGA SSRDIRLRDI FLVEGEKRFK P
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