| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0841 |
|---|
| Symbol | |
|---|
| ID | 6092271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 865286 |
|---|
| End bp | 866470 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642488039 |
|---|
| Product | RecB family-like nuclease |
|---|
| Protein accession | YP_001738876 |
|---|
| Protein GI | 170288638 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2251] Predicted nuclease (RecB family) |
|---|
| TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAA GCTACGAAGA TATGGAAAAT TTCTTGGTGT GTCCAAGGCG ATATTACCTT
TCAAAAAAAA TTTCAAAAGA GGTTTCTCCG AATTTTTCGG AGGAGTTAAT GGAGGCTGGA
TTCCCTCTCG AAAATCCTGT GATCGTGTGT GAGTTTGAGG GTCATGGATT GGTTTCAAAT
CCCGATCTGG TTGTGAAAGA AAGGGATGGA TGGAGAATTA TTCTAAGAAA GAACGCAAAA
AGGTTTAAAG ACAAATACAT CCTTGAGAGC GCTTATCATG CCCTGGTTTT CTCAAAAGCT
GGTCTGAAGG TTTCTGGAGT GGAGATCGTA TCCGACAGCT TCTCAAGAAA GATGGAAAAC
TGGAAAAATC TGATACCCAT CGTCGAAGAT GTTTTGAGAG AAATGTTGAC ATTAGATGAT
GATCCTCATC CCAGAGTGGG AAAACACTGT AGATACTGTG ATTTTCTCGA AGATTGCGAA
GGGAAGCTTC TTGAAGAGAA GAGTTTGCTT CTGGTGAACG GGATAGGAGA AGAAACGTAC
AGGGTTCTCT ATGGAATGGG TATAGAAACG CTGGAAGATC TCGCAGGGGC GGACCAGAGA
ATCCTGGAAA AGGTATTTGG AAAAGAGAAG GGAAAAAGGT TCATCATGGC GGCGAGGGCG
TTTCTCGAGA ATAGAGTGAT AATGATAACT CCTCCGGAAG ATCTTCCAGA AGGAACAATA
GTTGACATAG AGTATCATCC AGCGGAAGAG AGTGATTTTC TCTATGGGTT TTTAATAGGT
GATGAGTACA GATATTTTCT GGAAGAAGAT CAAGAAGATC TGATCGCATT TTTGAACTCT
CTGGATGATG GAAGTGTTCT CTACCATTAT CATGGACCAG AGAAGAGAAA GCTGATTTCA
TTGATCGGCA GAAACAAAAG GATGAATTTT CTCGATGTGT TCTCAATTCT GAGGAATCAC
TTCGTTTTTC CGGTTATGTC CTACTCACTC AAAAGAATCG CTAAGTATCT GGGGTACGAT
TGGAGAACGT CTCTGAATGG TTATGAAATA CTGCGGCTTT ATGAGAAATG GAAAAAAACG
AGAAACGAGG AGCTTCTAAA GCAGATGCTC CTGTACAACG AAGATGATGT GAGGGCAACG
AAGTTGGTCC TGGATTTCAT GAGGTCTTAC TCTTCTTTTT CATAG
|
|---|
| Protein sequence | MTISYEDMEN FLVCPRRYYL SKKISKEVSP NFSEELMEAG FPLENPVIVC EFEGHGLVSN
PDLVVKERDG WRIILRKNAK RFKDKYILES AYHALVFSKA GLKVSGVEIV SDSFSRKMEN
WKNLIPIVED VLREMLTLDD DPHPRVGKHC RYCDFLEDCE GKLLEEKSLL LVNGIGEETY
RVLYGMGIET LEDLAGADQR ILEKVFGKEK GKRFIMAARA FLENRVIMIT PPEDLPEGTI
VDIEYHPAEE SDFLYGFLIG DEYRYFLEED QEDLIAFLNS LDDGSVLYHY HGPEKRKLIS
LIGRNKRMNF LDVFSILRNH FVFPVMSYSL KRIAKYLGYD WRTSLNGYEI LRLYEKWKKT
RNEELLKQML LYNEDDVRAT KLVLDFMRSY SSFS
|
|---|
| |