| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0747 |
|---|
| Symbol | |
|---|
| ID | 6092164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 761862 |
|---|
| End bp | 763610 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642487932 |
|---|
| Product | hydrogenase, Fe-only |
|---|
| Protein accession | YP_001738782 |
|---|
| Protein GI | 170288544 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCGGACG TGACGGTTGT TATAAATGGT AGAACGCTTG CGGTACCTGA CAACTTGACG
GTCATTGAAG CCTGTGAAAA GGCGGGAATA GAGATTCCTG CTTTGTGTCA CCACCCAAGG
CTTGGGGAAT CAATAGGTGC GTGTAGAGTC TGTGTCGTTG AGGTGGAAGG AGCGAGGAAT
CTTCAACCTG CGTGTGTGAC AAAAGTGAGA GATGGTATGG TGATAAAGAC CTCTTCTGAC
AGGGTAAAAA CAGCCAGGAA GTTCAACCTC GCGCTTCTTC TCTCTGAACA CCCCAACGAT
TGTATGACGT GTGAAGCGAA TGGAAGGTGT GAGTTCCAGG ATCTGATCTA CAAGTACGAT
GTGGAACCCA TTTTCGGATA CGGTACCAAA GAAGGGTTGG TCGACAGGAG CAGTCCTGCT
ATAGTCAGAG ATCTTTCCAA ATGTATCAAG TGCCAGCGTT GTGTTAGAGC ATGTTCCGAA
CTTCAGGGAA TGCACATCTA CTCTATGGTG GAGAGGGGTC ACAGAACTTA TCCCGGAACT
CCTTTCGACA TGCCCGTTTA TGAAACAGAT TGTATAGGTT GTGGTCAGTG TGCTGCGTTC
TGTCCAACGG GCGCTATAGT TGAAAATTCG GCGGTAAAGG TTGTTCTGGA AGAACTGGAA
AAGAAAGAAA AGATCCTCGT CGTTCAAACC GCACCATCGG TGAGAGTGGC GATTGGCGAA
GAATTTGGAT ACGCCCCTGG TACCATTTCT ACTGGCCAGA TGGTTGCTGC TCTCAGAAGA
CTCGGCTTCG ATTACGTCTT CGACACGAAC TTTGGGGCAG ACCTTACCAT AATGGAAGAA
GGAAGTGAAT TTCTCGAAAG ACTTGAAAAA GGCGACCTTG AGGACCTTCC CATGTTCACT
TCCTGTTGTC CTGGATGGGT GAACCTTGTG GAAAAGGTCT ATCCCGAACT CAGGACGAGA
CTTTCTTCTG CCAAGTCACC ACAGGGAATG CTCTCTGCTC TGGTGAAAAC CTACTTTGCG
GAAAAACTCG GAGTGAAACC GGAAGACATT TTCCACGTAT CCATCATGCC CTGCACCGCG
AAGAAGGACG AGGCTCTGAG AAAACAGCTC ATGGTGAACG GAGTTCCAGC GGTGGATGTT
GTTCTCACCA CAAGGGAACT TGGGAAGCTC ATAAGGATGA AGAAGATACC GTTCGCGAAC
CTTCCAGAAG AAGAATACGA CGCACCGCTT GGAATCTCCA CGGGAGCGGC GGCACTCTTT
GGTGTTACAG GTGGTGTGAT GGAGGCTGCT TTGAGAACTG CGTACGAACT CAAAACGGGA
AAGACACTAC CGAAGATCGT TTTTGAAGAT GTGAGAGGAC TCAAAGGTGT CAAGGAAGCC
GAAATAGATC TGGATGGCAA AAAGATAAGG ATTGCTGTGG TTCACGGTAC AGCCAACGTG
AGAAATCTGG TGGAAAAGAT TCTGAGAAGA GAAGTGAAGT ATCATTTCGT TGAAGTGATG
GCGTGTCCCG GTGGATGTAT CGGTGGAGGA GGTCAGCCCT ACAGCAGAGA TCCAGAGATC
CTCAGAAAGA GGGCGGAAGC CATCTACACC ATCGACGAGA GAATGACTCT GAGGAAGTCT
CACGAGAACC CTGCCATAAA GAAACTGTAC GAAGAGTACC TCGAACATCC GCTCAGTCAC
AAAGCTCACG AGCTGCTTCA CACCTACTAC GAAGACAGAT CGAGGAAGAA AAAACTTGCG
GTAAAATAA
|
|---|
| Protein sequence | MADVTVVING RTLAVPDNLT VIEACEKAGI EIPALCHHPR LGESIGACRV CVVEVEGARN
LQPACVTKVR DGMVIKTSSD RVKTARKFNL ALLLSEHPND CMTCEANGRC EFQDLIYKYD
VEPIFGYGTK EGLVDRSSPA IVRDLSKCIK CQRCVRACSE LQGMHIYSMV ERGHRTYPGT
PFDMPVYETD CIGCGQCAAF CPTGAIVENS AVKVVLEELE KKEKILVVQT APSVRVAIGE
EFGYAPGTIS TGQMVAALRR LGFDYVFDTN FGADLTIMEE GSEFLERLEK GDLEDLPMFT
SCCPGWVNLV EKVYPELRTR LSSAKSPQGM LSALVKTYFA EKLGVKPEDI FHVSIMPCTA
KKDEALRKQL MVNGVPAVDV VLTTRELGKL IRMKKIPFAN LPEEEYDAPL GISTGAAALF
GVTGGVMEAA LRTAYELKTG KTLPKIVFED VRGLKGVKEA EIDLDGKKIR IAVVHGTANV
RNLVEKILRR EVKYHFVEVM ACPGGCIGGG GQPYSRDPEI LRKRAEAIYT IDERMTLRKS
HENPAIKKLY EEYLEHPLSH KAHELLHTYY EDRSRKKKLA VK
|
|---|
| |