| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0646 |
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| Symbol | |
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| ID | 6092063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 655009 |
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| End bp | 656265 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642487832 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_001738682 |
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| Protein GI | 170288444 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00455068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGA CACTCGCAGA AAAGATCTTT TCTGAACATG TTGGAAGAGA CGTGAAAGCA
GGTGAAATCG TACTCGCGAG AGTGGATATA GCCATGGCCC AGGATGGAAC AGGCCCTCTG
ATGATAAACG AATTCAGAGA ACTCGGTTTC AAAGAAGTGA AGGTCCCGAA GGCCTTCCTC
TTCATCGATC ATGCTTCTCC GAGCCCGAGG AAAGAGCTTT CGAACTCGCA GAAGATGATG
AGAGAATTTG GAAAAGAGAT GGGAGTCAAG GTTTTCGATG CGGGAGACGG GATATCCCAC
CAGATCCTCG CGGAAAAATA CGTGAAACCC GGCGATCTGG TAGCAGGTGC GGATTCGCAC
ACCTGCACTG CCGGTGGGCT CGGTGCTTTC GGAACGGGAA TGGGGTCCAC AGATGTTGCG
ATCATCTTCG GGCTTGGACA GAACTGGTTC AAAGTACCTG AGTCGATCAA AGTTGTGGTG
AACGGGAAGT TACAGGATGG AGTTTACGCG AAAGACATTA TTCTCGAGAT CGCGAGAATT
CTGGGAAGCG ACGGCGCAAC TTACAAAGCG TTGGAGTTCC ACGGAAGCTG TATCGAAAAT
ATGAATGTGG AGGACAGACT CACCATTTCC AACATGGCGG TGGAAGTGGG AGCGAAAGCA
GGTCTCATGC CTTCTGATGA GAAGACCAGA GAGTTCCTGA AAAAGATGGG AAGAGAGGAG
GACTTCAGAG AGTTGAAAGC AGATCCAGAC GCGGTTTACG AGACAGAGAT AGAGATAGAT
GCCACCACAC TCGAACCACT CGTCTCTTTG CCTCACTATG TGGACAACGT GAGAAAGGTA
AGCGAGGTTG AAAAGGAAAA GATAAAGATA GATCAAGTGT TCATAGGAAC CTGTACGAAC
GGAAGACTCC AGGATCTTGA GATCGCTTTG AAGATTCTTG AGAAACACGG AAAGCATCCG
GATGTGAGGC TGATCGTTGG CCCTGCTTCA AGGAAGGTCT ACATGGACGC CCTTGAAAAG
GGAATAATCA AGAAATTCGT TGAACTCGGA GCGGCAGTTA TACCACCAGG TTGCGGCCCG
TGTGTTGGAA TTCACATGGG TGTTCTTGGA GACGGAGAGA GGGTACTTTC CACGCAGAAC
AGAAACTTCA AGGGAAGGAT GGGGAATCCC AATGCGGAGA TATACCTTGC TTCTCCTGCA
ACGGCGGCAG CCACCGCGGT AACCGGATAC ATCACAGATC CGAGAAGGTT CATTTGA
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| Protein sequence | MGKTLAEKIF SEHVGRDVKA GEIVLARVDI AMAQDGTGPL MINEFRELGF KEVKVPKAFL
FIDHASPSPR KELSNSQKMM REFGKEMGVK VFDAGDGISH QILAEKYVKP GDLVAGADSH
TCTAGGLGAF GTGMGSTDVA IIFGLGQNWF KVPESIKVVV NGKLQDGVYA KDIILEIARI
LGSDGATYKA LEFHGSCIEN MNVEDRLTIS NMAVEVGAKA GLMPSDEKTR EFLKKMGREE
DFRELKADPD AVYETEIEID ATTLEPLVSL PHYVDNVRKV SEVEKEKIKI DQVFIGTCTN
GRLQDLEIAL KILEKHGKHP DVRLIVGPAS RKVYMDALEK GIIKKFVELG AAVIPPGCGP
CVGIHMGVLG DGERVLSTQN RNFKGRMGNP NAEIYLASPA TAAATAVTGY ITDPRRFI
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