Gene TRQ2_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0611 
Symbol 
ID6092028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp616398 
End bp617408 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content47% 
IMG OID642487797 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_001738647 
Protein GI170288409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000692559 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAA AGCTTCTTTT GATGCTGATT TTAGGCGTGT TTTTAGTGTC GGCTGTGTTC 
GGTGCAAAGT ACACACTGAG ATTTGGACAC GTTCTTGCTC CAGGTGAACC GTACCATCAG
GCGTTTCTGA AATGGGCCAA GGCAGTTGAG GAGAGAACGA ACGGCGATGT TAGAATTGAA
GTCTTCCCGA GTTCACAGCT TGGTGTGGAA GAGGACATCA TCGAGCAGAT CAGAATGGGA
GCGCCTGTGG GATGGAACAC GGACTCTGCA AGGCTTGGAA TGTACGTTAA AGACATCGGC
GTCATGAACC TTGCATACTT CATCGATTTC ATGGGCGCAA AAACTCCTGA AGAGGCGATG
GAGGTTCTGA AGAAGATCAA GCAATCTCCA ACAATGCAGA AGTGGTTGAA AGAGTTGGAA
CAGAAATTCG GTATAAAGGT TCTCTCCTTC TACTGGGTGC AGGGTTACAG ACACTTTGTG
ACAAACAAAC CCATCAGGGA ACCGGAAGAC CTGAATGGTT TGAGAATCAG AACTCCCGGT
GCGCCTGCAT GGCAGGAATC CATAAGAGCT CTTGGTGCCA TCCCTGTTGC CGTCAACTTC
GGAGAGATCT ACACAGCGGT CCAGACGAAA GCGGTCGATG GAGCAGAACT CACTTACGCG
AATGTTTACA ACGGTGGTCT ATACGAAGTT TTGAAGTACA TGTCTGAAAC GGGACACTTC
CTTCTCATCA ACTTCGAAAT CGTCAGCGCA GACTGGTTCA ACAGCCTGCC CAAGGAATAT
CAGAAGATTA TTGAGGAAGA GATTGACAAA GCGGGAATCG AAGTTTCTCT CAAAATCATG
AAAGAACTCG AAGAAGAATA CAAACAGAAG TGTATTGAAA AGGGTATGAC AGTGATACCA
GCTTCTGAAA TCGACAAGGA AGCCTTTATG GAAAGGGCAA AACAGGCTTA CAAGAATCTC
GGTCTTGAGG ATGCTCTCAA CCAGTTGATC AAGGAAGTGA AGGGAGAGTA A
 
Protein sequence
MGKKLLLMLI LGVFLVSAVF GAKYTLRFGH VLAPGEPYHQ AFLKWAKAVE ERTNGDVRIE 
VFPSSQLGVE EDIIEQIRMG APVGWNTDSA RLGMYVKDIG VMNLAYFIDF MGAKTPEEAM
EVLKKIKQSP TMQKWLKELE QKFGIKVLSF YWVQGYRHFV TNKPIREPED LNGLRIRTPG
APAWQESIRA LGAIPVAVNF GEIYTAVQTK AVDGAELTYA NVYNGGLYEV LKYMSETGHF
LLINFEIVSA DWFNSLPKEY QKIIEEEIDK AGIEVSLKIM KELEEEYKQK CIEKGMTVIP
ASEIDKEAFM ERAKQAYKNL GLEDALNQLI KEVKGE