Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0520 |
Symbol | |
ID | 6091935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 524081 |
End bp | 524971 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642487707 |
Product | auxin efflux carrier |
Protein accession | YP_001738559 |
Protein GI | 170288321 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00692662 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTATA CGACGTTCTC GGCGATAATT CCTTCTTTTC TCATAATCCT CATCGGCTAC ACTTTGGGGA AAGTTTTTTC TGAAGAAACA ATGGGTCTTG CTTCAAAAGT TGCAATCTGG GTCATGGTTC CAACGGTAAC GTTTACCTTT ATAAACGAAT ACACTCCCAG TTTTTCAACT CTTGGAGAAT TCGGACTTGG AGTGGCTATT ATTTTTGTTA TCTTCTATCT TTATTCCAGA CTCTTCAAGG AGAAAAAAGA AGTGATTCAC GTCACCGCAG TTACCGCAAA CGTTGGCTAT TTGGGATATC CTATCCTTCT TTCTTTGTGG GGAGAAGAAG CACTTTCTCT CGGAGTGGTT TACGCCACCC TGAACATCAT CATGTTCTCC GCAGTTCTTC CCATGTTCCT TGGTGAGAAA GTGAACATTA AAAATCTGTT CAGACTTCCT TACGTGTACG CTCTGATTGC AGGATTTCTA ACCGGAAAAT TGGGCTGGAG TTTTCGAGAA CTTCCCGAAT GGCTTGTAAA TGCTATTTTG ATGTTGAAGC AATCTGCCAT ACCGTACCTT CTTCTTTACG TGGGATTGTC TGTTTCCAAA CTGAAACTGG GAAGACATCT TTCGAAGATT GGCGGGATCA TCGTTGTGAA TAAGCTCTTC CTTGCCCCCC TCATTGCACT GGTTTTCGCT CTGATTTACG GTCTTGAAGG ACTCACAGCC AAGGTTTTCG TGCTGGAAAC CGCGATGCCT GCTGCTGTGA ACGCAGTGGT TCTCACTTCT GCCCTCGGTG GAGACAGTGA AACAGTGGGT TACGGTGTTA CTCTCACCAC TTTCTTTGCC ATCTTCACTC TTCCTGTCTG GGCTGTCATC TTAGAGAGAA TATTCAGTTG A
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Protein sequence | MLYTTFSAII PSFLIILIGY TLGKVFSEET MGLASKVAIW VMVPTVTFTF INEYTPSFST LGEFGLGVAI IFVIFYLYSR LFKEKKEVIH VTAVTANVGY LGYPILLSLW GEEALSLGVV YATLNIIMFS AVLPMFLGEK VNIKNLFRLP YVYALIAGFL TGKLGWSFRE LPEWLVNAIL MLKQSAIPYL LLYVGLSVSK LKLGRHLSKI GGIIVVNKLF LAPLIALVFA LIYGLEGLTA KVFVLETAMP AAVNAVVLTS ALGGDSETVG YGVTLTTFFA IFTLPVWAVI LERIFS
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