Gene TRQ2_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0520 
Symbol 
ID6091935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp524081 
End bp524971 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content44% 
IMG OID642487707 
Productauxin efflux carrier 
Protein accessionYP_001738559 
Protein GI170288321 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00692662 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTATA CGACGTTCTC GGCGATAATT CCTTCTTTTC TCATAATCCT CATCGGCTAC 
ACTTTGGGGA AAGTTTTTTC TGAAGAAACA ATGGGTCTTG CTTCAAAAGT TGCAATCTGG
GTCATGGTTC CAACGGTAAC GTTTACCTTT ATAAACGAAT ACACTCCCAG TTTTTCAACT
CTTGGAGAAT TCGGACTTGG AGTGGCTATT ATTTTTGTTA TCTTCTATCT TTATTCCAGA
CTCTTCAAGG AGAAAAAAGA AGTGATTCAC GTCACCGCAG TTACCGCAAA CGTTGGCTAT
TTGGGATATC CTATCCTTCT TTCTTTGTGG GGAGAAGAAG CACTTTCTCT CGGAGTGGTT
TACGCCACCC TGAACATCAT CATGTTCTCC GCAGTTCTTC CCATGTTCCT TGGTGAGAAA
GTGAACATTA AAAATCTGTT CAGACTTCCT TACGTGTACG CTCTGATTGC AGGATTTCTA
ACCGGAAAAT TGGGCTGGAG TTTTCGAGAA CTTCCCGAAT GGCTTGTAAA TGCTATTTTG
ATGTTGAAGC AATCTGCCAT ACCGTACCTT CTTCTTTACG TGGGATTGTC TGTTTCCAAA
CTGAAACTGG GAAGACATCT TTCGAAGATT GGCGGGATCA TCGTTGTGAA TAAGCTCTTC
CTTGCCCCCC TCATTGCACT GGTTTTCGCT CTGATTTACG GTCTTGAAGG ACTCACAGCC
AAGGTTTTCG TGCTGGAAAC CGCGATGCCT GCTGCTGTGA ACGCAGTGGT TCTCACTTCT
GCCCTCGGTG GAGACAGTGA AACAGTGGGT TACGGTGTTA CTCTCACCAC TTTCTTTGCC
ATCTTCACTC TTCCTGTCTG GGCTGTCATC TTAGAGAGAA TATTCAGTTG A
 
Protein sequence
MLYTTFSAII PSFLIILIGY TLGKVFSEET MGLASKVAIW VMVPTVTFTF INEYTPSFST 
LGEFGLGVAI IFVIFYLYSR LFKEKKEVIH VTAVTANVGY LGYPILLSLW GEEALSLGVV
YATLNIIMFS AVLPMFLGEK VNIKNLFRLP YVYALIAGFL TGKLGWSFRE LPEWLVNAIL
MLKQSAIPYL LLYVGLSVSK LKLGRHLSKI GGIIVVNKLF LAPLIALVFA LIYGLEGLTA
KVFVLETAMP AAVNAVVLTS ALGGDSETVG YGVTLTTFFA IFTLPVWAVI LERIFS