| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0412 |
|---|
| Symbol | miaA |
|---|
| ID | 6091817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 402249 |
|---|
| End bp | 403166 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642487590 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_001738451 |
|---|
| Protein GI | 170288213 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.198444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAG CCATAGTCGG TGGACCCACT GCTGTCGGAA AGACAGATAT CATGATCGAA
GTGTGTGAAG AGATAGGTGC GGAGATCATC TCGATGGACT CGAGGCAGAT CTATCGCTAC
ATGGATATAG GAACAGCTAA ACCAACACCG GAGCAGAGAA AAAGGGTACC TCACCACATG
ATCGACATAC TGGATCCTGA CGAATATTAC AACGCTTTTC TTTACAGGAA AGATTCACTG
AAGGCAGTGG AGGCCATTCT CAAGCGTGGG AAGATACCCG TATACGTGGG TGGAACGGGG
CTCTATGCGG ATGCTCTTGT GAGGGGTATA TTCGAGGGAG TGCCCGCAGA TGAGAACATA
AGAAAGGAAT TGAGAGAACT CGAAAGAAGG GAACCAGGGA TCCTGAGGAA AATGCTCGAA
GAATTCGATC CAGAGGCGGC AACACGTATT CATCCGAACG ACCTTAAAAG AACCATCAGA
GCACTCGAAG TTTATATGAA GACGGGAAGG AGGATATCAG AACTTCAGAA GGAAACAAAA
GGAGACGACA GGTTCTTCAT AATAGTGCTG ACGAGGGAAA GGTACGATCT CTACGACAGG
ATAAACAGAA GGGTCGACAG AATGATAGAG ATGGGTCTTG TGGACGAGGT AAAGAGACTC
TTGAGTATGG GCTACTCAAA AGACCTGAAC TCAATGAAGA CGATAGGATA CAAAGAAGTG
ATCGAATACC TGGAAGGAAA GTACGACTTC GAAAAGATGG TTCATCTCAT AAAGAGAAAC
ACAAGGCACT TTGCAAGAAG ACAGATCATA TGGTTCAAGA GGTACGAGAA CGCCATATGG
TACAATTTAA CTTTCGTGAG CAAAGAGGAG TTGAAGAAGA CTTTGAAGGA ACTCATAGTG
AAGAATTTTT CGGTATAA
|
|---|
| Protein sequence | MKIAIVGGPT AVGKTDIMIE VCEEIGAEII SMDSRQIYRY MDIGTAKPTP EQRKRVPHHM
IDILDPDEYY NAFLYRKDSL KAVEAILKRG KIPVYVGGTG LYADALVRGI FEGVPADENI
RKELRELERR EPGILRKMLE EFDPEAATRI HPNDLKRTIR ALEVYMKTGR RISELQKETK
GDDRFFIIVL TRERYDLYDR INRRVDRMIE MGLVDEVKRL LSMGYSKDLN SMKTIGYKEV
IEYLEGKYDF EKMVHLIKRN TRHFARRQII WFKRYENAIW YNLTFVSKEE LKKTLKELIV
KNFSV
|
|---|
| |