| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0381 |
|---|
| Symbol | |
|---|
| ID | 6091786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 368021 |
|---|
| End bp | 369085 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642487559 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_001738420 |
|---|
| Protein GI | 170288182 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAG CGGTTTTACC TGGAGACGGC ATAGGTCCCG AGGTTGTAAG GGAAGCTCTT
AAAGTGCTCG AGGTGGTGGA AAAGAAAACG GGGAAAACCT TTGAGAAAGT CTTTGGACAC
ATCGGAGGGG ATGCCATAGA CAAATTCGGT GAACCCCTTC CTGAAGAGAC AAAAAAGATA
TGTCTGGAAG CCGACGCGAT CTTCCTTGGA AGCGTCGGAG GACCTAAATG GGACGATCTT
CCTCCGGAGA AGAGGCCGGA AATAGGGGGG CTTCTTGCCC TAAGGAAGAT GCTCAACCTT
TACGCAAACA TAAGACCGAT AAAGGTCTAC AGATCGCTTG TGCATGTCTC TCCTTTGAAA
GAAAAGGTGA TTGGATCCGG GGTCGATCTT GTGACCGTCA GGGAACTTTC CTACGGAGTT
TACTACGGCC AGCCGAGGGG ATTGGATGAA GAAAAGGGAT TCGACACCAT GATCTACGAC
AGAAAAACTG TGGAACGGAT CGCGAGAACT GCCTTTGAAA TCGCAAAAAA CAGAAGAAAA
AAGGTCACCT CCGTCGACAA AGCGAACGTC CTCTACAGTT CTATGCTGTG GAGGAAAGTT
GTGAACGAAG TAGCGAGAGA ATACCCTGAT GTGGAGCTGA CGCACATGTA TGTGGACAAC
GCTGCCATGC AGCTCATCCT GAAACCATCG CAGTTCGATG TGATCCTCAC AACGAACATG
TTTGGAGACA TTCTCTCGGA TGAGAGCGCG GCACTTCCTG GTTCTCTTGG TCTTCTGCCG
TCCGCGTCTT TCGGTGATAA GAACCTCTAC GAACCGGCAG GAGGTTCCGC TCCTGATATA
GCCGGAAAGA ACATCGCCAA CCCGATCGCA CAGATCCTCT CTCTCGCCAT GATGCTCGAG
CATTCCTTTG GAATGGTGGA AGAGGCAAGA AAGATAGAAA GAGCGGTTGA GCTGGTGATA
GAAGAGGGAT ACAGAACCAG AGACATCGCA GAGGATCCAG AAAAGGCGGT TTCGACCTCT
CAGATGGGAG ATCTCATATG TAAAAAACTC GAAGAAATAT GGTGA
|
|---|
| Protein sequence | MKIAVLPGDG IGPEVVREAL KVLEVVEKKT GKTFEKVFGH IGGDAIDKFG EPLPEETKKI
CLEADAIFLG SVGGPKWDDL PPEKRPEIGG LLALRKMLNL YANIRPIKVY RSLVHVSPLK
EKVIGSGVDL VTVRELSYGV YYGQPRGLDE EKGFDTMIYD RKTVERIART AFEIAKNRRK
KVTSVDKANV LYSSMLWRKV VNEVAREYPD VELTHMYVDN AAMQLILKPS QFDVILTTNM
FGDILSDESA ALPGSLGLLP SASFGDKNLY EPAGGSAPDI AGKNIANPIA QILSLAMMLE
HSFGMVEEAR KIERAVELVI EEGYRTRDIA EDPEKAVSTS QMGDLICKKL EEIW
|
|---|
| |