| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0114 |
|---|
| Symbol | |
|---|
| ID | 6091516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 108854 |
|---|
| End bp | 109669 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642487296 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001738159 |
|---|
| Protein GI | 170287921 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAA TCAGAAAGGT TTTGACTTAT GTGGTTCTTG TTCTTTTTGC GATTCTCTCA
GTGTGGCCGT TTTACTGGAT CGCAAAGACC TCTTTCGAGG CAGGGGGCAA CGTGTACAAG
TATCCACCGA GTCTCATCCC GTACCCGGCA ACCTTTTCAA ACTACGTTGG GGCATGGAAA
ACTGTGAAAC TTGGAAATTA CTATCTGAAC ACGATTATAA TAGCGGGTTT TGGCACACTT
TTGAACGTAC TCTTCTCACT GATGGTGGCC TATCCTCTCG CTAGGATAGA TTTCAAAGGA
AAACAGCTGG TGCTCTTTCT GATTCTTCTT CCGATGATGA TTCCAGTTCA GAACACCTTG
ATAGTCAACT ACCTCACCCT CAGAAAACTC GGTCTTTTGA ACACCTACAC TGGAGTGATT
CTCCCTCAGG CCGTTACGAT CTTCGGTATC TTCATGATGA GACAGGCTTA CTTGAGTATT
CCAAAGAGCT TTGAAGACGC TGCGAGGATA GATGGTGCCG GAGAACTTTA CATATGGTGG
AGGATAATCA CACCTCTGAT AAAACCAGAT ATTGCCACTC TCGTTGTGTT CCAGGTGATC
ACCTGGTGGG ACAATTTCCT GTGGCCTCTC ATAGTTCTGT CCGATTCCAA CAAGTATCCA
CTTTCTGTGG CACTCGTTTA TCTGAACAGC ACTTTCCAGG TGAATTTCAG ATACACCGCA
GCTGGAATCG TTCTGGCAAT ACTTCCTGTT GTGCTGCTGT TCATCTTCGC TCAGAGGTAC
ATAATAAACG CTATTGCCGG TGGCGTGAAA TACTGA
|
|---|
| Protein sequence | MPKIRKVLTY VVLVLFAILS VWPFYWIAKT SFEAGGNVYK YPPSLIPYPA TFSNYVGAWK
TVKLGNYYLN TIIIAGFGTL LNVLFSLMVA YPLARIDFKG KQLVLFLILL PMMIPVQNTL
IVNYLTLRKL GLLNTYTGVI LPQAVTIFGI FMMRQAYLSI PKSFEDAARI DGAGELYIWW
RIITPLIKPD IATLVVFQVI TWWDNFLWPL IVLSDSNKYP LSVALVYLNS TFQVNFRYTA
AGIVLAILPV VLLFIFAQRY IINAIAGGVK Y
|
|---|
| |