Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_R0071 |
Symbol | |
ID | 4075501 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 622244 |
End bp | 623698 |
Gene Length | 1455 bp |
Protein Length | |
Translation table | |
GC content | 55% |
IMG OID | 640715102 |
Product | 16S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.129895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGAGTTTGAT CCTGGCTCAG AACGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC GAGATCTTCG GATCTAGCGG CGGACGGGTT AGTAACGCGT GGGAACGTAC CCAAAGGTAG GGAATAGCCA CTGGAAACGG TGAGTAATAC CCTATGTGCC CTTCGGGGGA AAGATTTATC GCCTTTGGAT CGGCCCGCGT TAGATTAGGT AGTTGGTGGG GTAACGGCCT ACCAAGCCTA CGATCTATAG CTGGTTTTAG AGGATGATCA GCAACACTGG GACTGAGACA CGGCCCAGAC TCCTACGGGA GGCAGCAGTG GGGAATCTTG GACAATGGGG GCAACCCTGA TCCAGCCATG CCGCGTGAGT GATGAAGGCC CTAGGGTCGT AAAGCTCTTT CGCCAGGGAT GATAATGACA GTACCTGGTA AAGAAACCCC GGCTAACTCC GTGCCAGCAG CCGCGGTAAT ACGGAGGGGG TTAGCGTTGT TCGGAATTAC TGGGCGTAAA GCGCGCGTAG GCGGACTGGA AAGTTGGGGG TGAAATCCCA GGGCTCAACC CTGGAACTGC CTCCAAAACT ATCAGTCTAG AGTTCGAGAG AGGTGAGTGG AATTCCGAGT GTAGAGGTGA AATTCGTAGA TATTCGGAGG AACACCAGTG GCGAAGGCGG CTCACTGGCT CGATACTGAC GCTGAGGTGC GAAAGTGTGG GGAGCAAACA GGATTAGATA CCCTGGTAGT CCACACCGTA AACGATGAAT GCCAGTCGTC GGGTAGCATG CTATTCGGTG ACACACCTAA CGGATTAAGC ATTCCGCCTG GGGAGTACGG TCGCAAGATT AAAACTCAAA GGAATTGACG GGGGCCCGCA CAAGCGGTGG AGCATGTGGT TTAATTCGAA GCAACGCGCA GAACCTTACC AACCCTTGAC ATCCTCGGAC CGCCAGAGAG ATTTGGCTTT CACTTCGGTG ACCGAGTGAC AGGTGCTGCA TGGCTGTCGT CAGCTCGTGT CGTGAGATGT TCGGTTAAGT CCGGCAACGA GCGCAACCCA CATCCTTAGT TGCCAGCAGT TCGGCTGGGC ACTCTAAGGA AACTGCCCGT GATAAGCGGG AGGAAGGTGT GGATGACGTC AAGTCCTCAT GGCCCTTACG GGTTGGGCTA CACACGTGCT ACAATGGCAG TGACAATGGG TTAATCCCAA AAAACTGTCT CAGTTCGGAT TGGGGTCTGC AACTCGACCC CATGAAGTCG GAATCGCTAG TAATCGCGTA ACAGCATGAC GCGGTGAATA CGTTCCCGGG CCTTGTACAC ACCGCCCGTC ACACCATGGG AGTTGGTTCT ACCCGACGAC GCTGCGCTAA CCTTCGGGGG GCAGGCGGCC ACGGTAGGAT CAGCGACTGG GGTGAAGTCG TAACAAGGTA GCCGTAGGGG AACCTGCGGC TGGATCACCT CCTTT
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Protein sequence | |
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