| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3865 |
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| Symbol | |
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| ID | 4074928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 116963 |
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| End bp | 118360 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004522 |
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| Product | glucuronate isomerase |
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| Protein accession | YP_611257 |
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| Protein GI | 99077998 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1904] Glucuronate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.159364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCT TTCTTCATCA GGATTTTTTG CTCGACACTG CGACAGCAAG GCGACTGTTT
CATGAGGTCG CGAGATATCT GCCGATTGTG GATTATCATA ATCACCTCCC GCCGGCTGAA
ATCGCCAGTG ATCGTACGTG GGAAAATCTG GGCGAGATGT GGCTCGCCCA TGATCACTAT
AAGTGGCGCG TCATGCGATG GGCTGGTATC GATGAAGCTC GGGTGACAGG TGACGCGACT
TGGCGCGAGA AATTCGACGC CTTTGCGGAG GCGATGCCTC GTGCTGTTCT CAACCCGGTT
CATCATTGGT CACATCTTGA GCTGTGGCGC TACTTCGATC TGAACGGCAC AGTGCTATCG
CCCATAAGCG CCGACAATGT TTGGGACGCG GCCAATGCGC AGCTGGGAGA AAAAGGGTAT
TCCGCGCAAA GCCTTTTACG CAAAATGAAG GTGGAGTTGG TCGGCACAAC AGATGACCCG
CTTGATACCC TAGAGCACCA TGCCGCAATG GCAGGCTCAG ACATCCGGGT GGTTCCAACC
TTCCGGCCCG ACAAATCCGT GCAGATAGAG GCTCCAGGTT TCGCGGCCTA CATGGACAGC
CTGGAGGCAC TTACACATCC CATCCATTCC TTTGATGATT TGGTCGCGGC CCTTTCCCTC
AGGCTGGATT ATTTCGTGGA GCAGGGGTGC AGAGCAGCCG ATCATGGGAT CAGCCACTTG
GATGCCGCTA ATATCCCTGG TGCCTTCGAT TTGGACGCGG CGCTCAAAGC CGCCCGACAG
GGAAAACCCA TCACACCGGA GCAAGTGGCG GGTCACCGTG CTGCGCTCTT CGACGCCCTT
GGACGTGCTT ATGCCGTACG CGGCTTGGTG ATGCAGTGCC ACATGAACGT TGTGCGCAAT
GGTTCATCTC GACTGTTGCT AGGAGTTGGT CCCGACGCAG GCGGTGATAG CATGCGCGAC
ACCGATATGG CCGGTCCGCT GAACATCCTG CTGGATCGGC TGGATCGTGA CGGGAAACTA
CCGCGTATGG TGCTTTATGG TCTTGACCCC TCCCGAAATC CCATCCTTGC TGCAACCGCT
GGCACCTTTC AGGATGGCTC GGTTCCTGGA AAGATACAGG CTGGCGCCGC TTGGTGGTTC
AATGACACGC TGGATGGGAT GGAAGCGCAG ATGCGTACCC TGGCCCAGGT TGGCCTTCTG
TCGACATTCC TTGGGATGTT GACAGATAGC CGCTCCTTCC TGTCTTTCCC TCGGCATGAG
TATTTCCGCC GCTTGTTGTG TGGCATGATT GGTCGCTGGG CCGAGACTGG CCACTTACCA
GATGACGCCG ACCTGCTCGA CCGACTGGTG CGCGACATCT GCTACAACAA CGCCAAGGCC
TGGTTTCTGG AGCAGTAA
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| Protein sequence | MTGFLHQDFL LDTATARRLF HEVARYLPIV DYHNHLPPAE IASDRTWENL GEMWLAHDHY
KWRVMRWAGI DEARVTGDAT WREKFDAFAE AMPRAVLNPV HHWSHLELWR YFDLNGTVLS
PISADNVWDA ANAQLGEKGY SAQSLLRKMK VELVGTTDDP LDTLEHHAAM AGSDIRVVPT
FRPDKSVQIE APGFAAYMDS LEALTHPIHS FDDLVAALSL RLDYFVEQGC RAADHGISHL
DAANIPGAFD LDAALKAARQ GKPITPEQVA GHRAALFDAL GRAYAVRGLV MQCHMNVVRN
GSSRLLLGVG PDAGGDSMRD TDMAGPLNIL LDRLDRDGKL PRMVLYGLDP SRNPILAATA
GTFQDGSVPG KIQAGAAWWF NDTLDGMEAQ MRTLAQVGLL STFLGMLTDS RSFLSFPRHE
YFRRLLCGMI GRWAETGHLP DDADLLDRLV RDICYNNAKA WFLEQ
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