Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3859 |
Symbol | |
ID | 4074922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | - |
Start bp | 111206 |
End bp | 112078 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638004516 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_611251 |
Protein GI | 99077992 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGCAGC GCAAAGGCAT TATTCTGGCC GGAGGCTCCG GCACCCGGCT TTATCCGATC ACCATGGCTG TCTCCAAGCA GCTCCTGCCG CTTTATGACA AGCCGATGAT CTACTATCCG ATCTCGGTAC TGATGCTGGC GGGTATTCGC GAGATCTGCG TCATCACCAC GCCGCAAGAC GCCGATCAGT TCCAGCGGCT CTTGGGCGAC GGCAGTCAAT GGGGCGTCAG ACTCACCTAT GTGGAGCAAC CCAGCCCCGA TGGTCTGGCG CAGGCCTTCA TTTTGGCCGA AGAGTTCCTC GCGGGGGCGC CCTCGGCGCT GGTGCTGGGC GACAACGTCT TTTTTGGCCA TGGGTTGCCG GAGCTTCTGG CGGCGGCGGA TGCCAAGGAG GCAGGTGGCA CCGTCTTTGG CTATCATGTG GCGGATCCCG AGCGCTATGG CGTGGTGGCC TTTGATGGCG ACGGGCGCGC CCATCAGATC ATTGAAAAAC CCGAGGTGCC GCCGTCGAAC TACGCGGTGA CCGGGCTCTA TTTTCTGGAC GGCTCTGCGC CTGCGCGCGC GCGCGAGGTC CAGCCCTCGG CGCGGGGCGA GCTGGAGATC ACCGATCTTT TGCAGATGTA TCTCAATGAG GGCAGCCTCT CGGTCGAAAC CATGGGACGG GGCTATGCCT GGCTTGATAC GGGTACGCAT GGCAGCCTTC TGGATGCGGG CAATTTTGTG CGCACCCTCC ACGAGCGTCA GGGTCTGCAG ACCGGTTGCT TGGAGGAGAT TGCCTATCAC GCGGACTGGA TCAGCCGCGA CGCGCTGGCA GAGCGGGCGG AGCTTTTCAA AAAGAACAGC TATGGTCAGT ATCTGAAACG ACTGTTGGGC TGA
|
Protein sequence | MTQRKGIILA GGSGTRLYPI TMAVSKQLLP LYDKPMIYYP ISVLMLAGIR EICVITTPQD ADQFQRLLGD GSQWGVRLTY VEQPSPDGLA QAFILAEEFL AGAPSALVLG DNVFFGHGLP ELLAAADAKE AGGTVFGYHV ADPERYGVVA FDGDGRAHQI IEKPEVPPSN YAVTGLYFLD GSAPARAREV QPSARGELEI TDLLQMYLNE GSLSVETMGR GYAWLDTGTH GSLLDAGNFV RTLHERQGLQ TGCLEEIAYH ADWISRDALA ERAELFKKNS YGQYLKRLLG
|
| |