Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3771 |
Symbol | |
ID | 4074943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | - |
Start bp | 15000 |
End bp | 16031 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638004430 |
Product | hypothetical protein |
Protein accession | YP_611166 |
Protein GI | 99077907 |
COG category | [S] Function unknown |
COG ID | [COG5397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.0472674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGC TAGGCATGAT TTCTCTCAGC AGTATCGCAA TGAGCGCCTA TACCGATCTG GTGCGCCTCC TGAAGGATGA GGCCTTGTCC GGTGTTGAAG GCAAGCCAAC GCTCAAAGAG CGCGGCGACA AGGCCTATTG GTACGCCGTG CGCCGCGTCG GAACGGAGAT GCGGTTCCTC TATATCGGCG AGGACAGTGA CGAGACACGT GCACGTATCG GACGGATCGA GGAACTGCGC GGGGCGGCCA AGGAACGTCA GGCAGAACGG TCTCGGCTCG TTCGACTTCT GCGCGCCGAA GGCATGACAC CCACCGACCG GTCGACCGGG TCCATCCTGT CGGCCATGGC CGCAGCGGGG ACATTCCGGT TGGGTGGCAC CATCGTCGGG ACGAATGCCT TCCGGCTCTA TGAGGGCGAG CTGGGTGTTC GTTTGCCTTT GGCGGGCATG GCCAATACAG CCGACATCGA TATCGCCCAG TTCGAAAAAC TGAGCGTGGC GTTGCAAGAT CAGGTCGACC CGGGCCTGGC CGAGACCTTC TCGGCACTCA AATTTGATCC CTTACCGGCT CTTGACCAAG GCCGGAGCTG GCGATGGGCC CAGGGCGGCA GTGGCCAGTT GGTCGAGTTC CTGACACCTG CGTTCGGGGA TGAGAGCGTC CGTGATCTGC CAGCATTGGG TGTGAGCGCG CAAGGATTGA ACTATCTCAA TTTTCTGATT GCCGAGCCGA TCCATGCGGC GGCGATCTAT CGGTCCGGCG TTCTGGTCCA GGTGCCGCGC CCGGAACGTT ACGCGATCCA CAAGCTGATC ATTGCCGATC GGCGTCGTGA CGGGGCAGGG AGCCTCAAAT CGGCGAAGGA CAGGGAGCAG GCTGCTTTCC TGATCGAGGC GATGGCCGAG GACCGTCCCG ATGATCTGTT GCAGGCTTAC GCCACGGCCA TGGAAGTCGG GCCGCGCTGG CGGGAGCATA TTGGGAACTC GTTGACGCGA ATGCCTGAGA CCAAGGGGAC GCTCGACAGC TTGGGCGCGT GA
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Protein sequence | MKLLGMISLS SIAMSAYTDL VRLLKDEALS GVEGKPTLKE RGDKAYWYAV RRVGTEMRFL YIGEDSDETR ARIGRIEELR GAAKERQAER SRLVRLLRAE GMTPTDRSTG SILSAMAAAG TFRLGGTIVG TNAFRLYEGE LGVRLPLAGM ANTADIDIAQ FEKLSVALQD QVDPGLAETF SALKFDPLPA LDQGRSWRWA QGGSGQLVEF LTPAFGDESV RDLPALGVSA QGLNYLNFLI AEPIHAAAIY RSGVLVQVPR PERYAIHKLI IADRRRDGAG SLKSAKDREQ AAFLIEAMAE DRPDDLLQAY ATAMEVGPRW REHIGNSLTR MPETKGTLDS LGA
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