Gene TM1040_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3730 
Symbol 
ID4075437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp789027 
End bp789482 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID638005250 
Producthypothetical protein 
Protein accessionYP_611959 
Protein GI99078701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.808369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGT TTCTTGTCGT GTTGGACGAC AGCCGAGAAT GCCTGAATGC GATGCGCTTT 
GCCGCGATGC GCGCCGCCAA TACTGGCGGT GGCGTCGTCA TCCTGTCGGT GATCCCGCCG
GATGAATTCA ATCACTGGAT CGGGGTCGGT GAAGTCATGC GTGAAGAGGC GCGCGAACGG
ATTCATGCGC ATTTTGAGGT CTTCGCGAAA TGGATGCGCG ACCGGCAGGG CGTGGACCCG
GAACTGGTGA TCCGCGAAGG CGATACGGTT CCCGAAATCC TCGCCCAGAT CGAAGCGGAT
CCCGAGGTGG GTGTTCTGGT GCTGGGCGCG GCCAGCGATC GCAAGGGCCC CGGCCCGATC
GTGACACAAC TGACCCGGAC GGCAGGCACG CTGCCGTTTC CGATCACAAT TGTGCCTGGC
GATATGTCGA AAGAGCGGCT TGAAGCAATC ACCTGA
 
Protein sequence
MRKFLVVLDD SRECLNAMRF AAMRAANTGG GVVILSVIPP DEFNHWIGVG EVMREEARER 
IHAHFEVFAK WMRDRQGVDP ELVIREGDTV PEILAQIEAD PEVGVLVLGA ASDRKGPGPI
VTQLTRTAGT LPFPITIVPG DMSKERLEAI T