Gene TM1040_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3715 
Symbol 
ID4075422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp774662 
End bp775264 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content60% 
IMG OID638005235 
Producthypothetical protein 
Protein accessionYP_611944 
Protein GI99078686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.23614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGC GGATTTTTCG GCCCGCCACA TGCCTTCCTC ACCCAGACCG CTTTCCCAGC 
CAGAGACCAT TCATGCAAAG CGAACGTGAA CGCAGATTCA TCGGCCCGCG CCGGGGGCAG
CTTCTTTTTG TTCTGTCCTT TCTGGCCTTG GCCGTAATGC TTTTGTCCCA GATCGGGACC
CAAACCGCAT GGGTCAGGAA GACCGATTTT TTCGCGCAGC CCCGGTTCTG GCCCGCTGTG
GGCGTTGGGG GCATGGTGGT CTTTACCGCA TTGCACCTGT GGAGGCTGCC GTTTCGCCGC
ATTGACCGCA GTGATCTGCG CGAAGCCCAG CGTTGGGCTG CCGCTCTGGA GTATATGCTC
TGGTTCATGG GGTATGTCGT GCTTGTGCCG CTTGCTGGCT ATCTGCCGGT GACGCTGGTG
TTCGTGCCGC TGCTCGCCTG GCGGATGGGC TATCGCAGCC CGCAGATGAT GGCGATCAGC
GCCGGGTTTG CGGTGTTCAT CGTCCTCTTT TTCAAAGGTG TCCTCGCCGT GCGCATCCCC
GGCGCCGCCC TTTATGAATA TCTTCCCGAT GCATGGCGCA GCTTTGCCAT CCTCTATCTC
TAA
 
Protein sequence
MARRIFRPAT CLPHPDRFPS QRPFMQSERE RRFIGPRRGQ LLFVLSFLAL AVMLLSQIGT 
QTAWVRKTDF FAQPRFWPAV GVGGMVVFTA LHLWRLPFRR IDRSDLREAQ RWAAALEYML
WFMGYVVLVP LAGYLPVTLV FVPLLAWRMG YRSPQMMAIS AGFAVFIVLF FKGVLAVRIP
GAALYEYLPD AWRSFAILYL