| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3666 |
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| Symbol | |
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| ID | 4075635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 717675 |
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| End bp | 719459 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005186 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_611895 |
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| Protein GI | 99078637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGT TTACACTCAA CCTTCTCTTT GTGGGCGCGT CCTTTGCGCT CTACATCGGG
ATCGCGATCT GGGCACGGGC CGGATCAACC TCTGAATTCT ATGCCGCCGG GCGCGGCGTG
CATCCTGTCA CCAACGGGAT GGCCACCGCG GCAGACTGGA TGTCGGCGGC TTCCTTTATC
TCCATGGCAG GTCTCATCGC CTTTACCGGC TATGACAACT CCTCCTTCCT GATGGGCTGG
ACCGGGGGCT ACGTGCTGCT CGCACTGCTG CTGGCACCAT ATCTGCGCAA GTTCGGCAAG
TTCACCGTCT CTGAATTCAT CGGCGACCGC TTCTATAGCC CGACTGCACG TCTGGTGGCG
GTGATATGTC TGCTGGTGGC CTCGATCACC TATGTGATCG GGCAAATGCA GGGTGTGGGT
ATCGCCTTTG GGCGTTTTCT TGAAATCGAC GCCTTTTGGG GTCTGCTGAT CGGTGCCTGT
GTTGTGTTTG CCTATGCGGT GTTTGGCGGC ATGAAGGGCG TGACCTACAC GCAGGTTGCA
CAATACTGCG TGCTGATTAC CGCCTACACG ATCCCGGCGG TGTTTATTTC GCTGCAACTC
ACTGGCAATC CGATCCCAGC CTTGGGGCTC TTTGGCTCCA CCGAGAGCGG CGAGCCGCTG
CTGGCCAAGC TCAACCAGAT CGTCACCGAC CTTGGCTTTG CGGAATACAC CGCAGCACAT
GGCTCCACCA TCAACATGGT GCTCTTCACC CTGTCGCTGA TGATCGGCAC CGCAGGTCTG
CCCCACGTCA TCATGCGCTT CTTTACGGTG CCGCGCGTGT CCGATGCGCG CTGGTCGGCG
GGCTGGACCC TTGTGTTCAT CGCGCTTCTC TATCTGACGG CGCCGGCCGT GGGCGCAATG
GCGCGCCTCA ACATCTCTGA GCTGATGTGG CCTAACGGGA CCGAAGCACA GGCTGTGAGT
GTCGAGCAGA TCGAAACCGA TCCTGAGTAC GCATGGATGG CGACGTGGCA GAAAACCGGC
CTTCTCGGTT GGGAAGACAA GAACGGCGAC GGGCGCATTC AGTACTACAA TGACGCCAAT
GCGGACCTGC AAGCCAAAGC CGAAGCAAAC GGTTGGAAAG GCAATGAGCT CACCAACTTC
AACCGCGACA TCCTTGTGCT TGCAAACCCT GAGATTGCAT CGCTCCCCGG TTGGGTGATC
GGTCTGGTGG CCGCAGGTGG TCTCGCGGCG GCGCTTTCGA CCGCAGCCGG TCTCTTGCTG
GCGATCTCCT CGGCGGTGAG CCACGACCTT CTCAAGGGTC AGCTGACTCC CAACATGTCG
GAGAAATCCG AACTGTTGGC GGCGCGGGTG TCGATGGCAG CTGCAATCGT GGTGGCGGTT
CTTCTGGGCC TCAACCCTCC GGGGTTTGCG GCGCAGACGG TGGCGTTGGC CTTTGGTCTT
GCGGCAGCCT CGATTTTCCC GGCGCTGATG ATGGGGATCT TCTCGACTCG CATCAACAAC
AGCGGTGCGG TTGCAGGCAT GCTGGCCGGT CTCGTGGTGA CCTTGCTCTA TATCTTCCTG
CACAAGGGCT GGTTCTTCAT CCCGGACACC AATTCGTTCA CCGATGCCGA CCCGCTCCTT
GGGCCGATCA AATCCACCTC CTTTGGTGCA ATCGGAGCTC TGGTCAACTT TGCGGTGGCT
TATGTCGTCA CCAACATGAC CAAGGAAACT CCGCAGCACA TCAAGGATCT CGTCGAGAGC
GTCCGTGTGC CGCGCGGCGC AGGTCAAGCG GTCGACGGTC ACTAA
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| Protein sequence | MDQFTLNLLF VGASFALYIG IAIWARAGST SEFYAAGRGV HPVTNGMATA ADWMSAASFI
SMAGLIAFTG YDNSSFLMGW TGGYVLLALL LAPYLRKFGK FTVSEFIGDR FYSPTARLVA
VICLLVASIT YVIGQMQGVG IAFGRFLEID AFWGLLIGAC VVFAYAVFGG MKGVTYTQVA
QYCVLITAYT IPAVFISLQL TGNPIPALGL FGSTESGEPL LAKLNQIVTD LGFAEYTAAH
GSTINMVLFT LSLMIGTAGL PHVIMRFFTV PRVSDARWSA GWTLVFIALL YLTAPAVGAM
ARLNISELMW PNGTEAQAVS VEQIETDPEY AWMATWQKTG LLGWEDKNGD GRIQYYNDAN
ADLQAKAEAN GWKGNELTNF NRDILVLANP EIASLPGWVI GLVAAGGLAA ALSTAAGLLL
AISSAVSHDL LKGQLTPNMS EKSELLAARV SMAAAIVVAV LLGLNPPGFA AQTVALAFGL
AAASIFPALM MGIFSTRINN SGAVAGMLAG LVVTLLYIFL HKGWFFIPDT NSFTDADPLL
GPIKSTSFGA IGALVNFAVA YVVTNMTKET PQHIKDLVES VRVPRGAGQA VDGH
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