Gene TM1040_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3659 
Symbol 
ID4075628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp712417 
End bp712956 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID638005179 
ProductBioY protein 
Protein accessionYP_611888 
Protein GI99078630 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA AAGATATCGT CCTGATCGCG CTCTTTGCGG CGCTCATTGC TGCCCTCGGC 
GTTGTGCCTC AGATCACCAT CCCGATGGCT GGCGGAGTAC CAATCACCGC GCAGTCCATG
GGCGTCATGC TCGCCGGGGC GCTCTTGGGT GCCAAACGTG GCGGCTTGGC CGTGGTGTTG
TTTCTCGTTT TGGTGGCCGT GGGTCTGCCG CTTCTGTCGG GGGGCCGAGG TGGCGCGGGC
GTGTTCTTTG GTGCCTCCGG TGGCTTCTTG ATCGGTTTCC CCATCGGTGC CTTTATGATC
GGCTTTCTCT TTGACAGACA CACGGGCCAG CCGGGGTTTG TGCCATCGCT GATCTATGTC
CTGATCGGTG GCGTCGGAGT GATCTACCTG CTGGGTGTCC CGTGGCTCGC ACAGGTGGCA
GAAATCTCGC TTTCACAGGC TCTTGCCGGA TCACTTGCAT TTGTGCCCGG AGACCTCATC
AAAGCAGTGC TCACTGTTTT GATCGCACGC GAAGTCCGCA AAGCGATGCC GCATCTCTGA
 
Protein sequence
MATKDIVLIA LFAALIAALG VVPQITIPMA GGVPITAQSM GVMLAGALLG AKRGGLAVVL 
FLVLVAVGLP LLSGGRGGAG VFFGASGGFL IGFPIGAFMI GFLFDRHTGQ PGFVPSLIYV
LIGGVGVIYL LGVPWLAQVA EISLSQALAG SLAFVPGDLI KAVLTVLIAR EVRKAMPHL