Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3659 |
Symbol | |
ID | 4075628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 712417 |
End bp | 712956 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638005179 |
Product | BioY protein |
Protein accession | YP_611888 |
Protein GI | 99078630 |
COG category | [R] General function prediction only |
COG ID | [COG1268] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA AAGATATCGT CCTGATCGCG CTCTTTGCGG CGCTCATTGC TGCCCTCGGC GTTGTGCCTC AGATCACCAT CCCGATGGCT GGCGGAGTAC CAATCACCGC GCAGTCCATG GGCGTCATGC TCGCCGGGGC GCTCTTGGGT GCCAAACGTG GCGGCTTGGC CGTGGTGTTG TTTCTCGTTT TGGTGGCCGT GGGTCTGCCG CTTCTGTCGG GGGGCCGAGG TGGCGCGGGC GTGTTCTTTG GTGCCTCCGG TGGCTTCTTG ATCGGTTTCC CCATCGGTGC CTTTATGATC GGCTTTCTCT TTGACAGACA CACGGGCCAG CCGGGGTTTG TGCCATCGCT GATCTATGTC CTGATCGGTG GCGTCGGAGT GATCTACCTG CTGGGTGTCC CGTGGCTCGC ACAGGTGGCA GAAATCTCGC TTTCACAGGC TCTTGCCGGA TCACTTGCAT TTGTGCCCGG AGACCTCATC AAAGCAGTGC TCACTGTTTT GATCGCACGC GAAGTCCGCA AAGCGATGCC GCATCTCTGA
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Protein sequence | MATKDIVLIA LFAALIAALG VVPQITIPMA GGVPITAQSM GVMLAGALLG AKRGGLAVVL FLVLVAVGLP LLSGGRGGAG VFFGASGGFL IGFPIGAFMI GFLFDRHTGQ PGFVPSLIYV LIGGVGVIYL LGVPWLAQVA EISLSQALAG SLAFVPGDLI KAVLTVLIAR EVRKAMPHL
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