| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3628 |
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| Symbol | |
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| ID | 4075055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 685988 |
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| End bp | 687112 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005147 |
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| Product | L-alanine dehydrogenase |
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| Protein accession | YP_611857 |
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| Protein GI | 99078599 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.243923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATCG GATGCCCAAC GGAAATTAAG CCGCAAGAAT TTCGCGTCGG CATGACGCCG
GACGCCGCGC GCGAGGCTAT TGCACATGGA CATCAGGTGA TGATCCAGAA AGGCGCAGGC
CTCGGCGCAG GTTTTCCCGA TGAGGATTAC CTCGCGGCGG GTGCGGCCAT TATCGACACG
GCCGAGGAGA TTTTTGCCGA CGCCGATATG ATCGTCAAAG TGAAAGAGCC GCAGGCGGTC
GAACGCAAGA TGCTGCGGGA GGGACAACTG CTGTTCACCT ACCTGCATCT GGCGCCAGAT
CCCGAACAGA CTCATGACCT GCTGGCGTCG GGCTGTACAG CGATTGCCTA TGAAACCGTG
ACGGACGACC GTGGTGGACT GCCGCTCCTT GCACCGATGT CTGAAGTGGC GGGCCGTCTG
GCGCCGCAGG TTGGCGCCTA CACCCTGCAA AAGGCCAATG GTGGACGCGG CGTGCTGATG
GGTGGCGTTC CCGGCGTTGC CCCTGCCAAG GTGGTGGTTG TCGGTGGCGG CGTTGTGGGC
ACCCATGCGG CCAAGATCGC TGCTGGTATG GGCGCGGATG TGACGGTGCT GGACCGGTCC
CTGCCCCGTC TCAAATATCT GGATGATGTC TTTGGCGGCA CCTTCAAGAA TCGGTATTCC
ACGGCCGGCG CCACCGCAGA ATTGATCCGC GACGCCGATA TGGTCATCGG TGCGGTATTG
ATCCCCGGCG CTGCCGCTCC AAAGCTTGTC TCGCGCGCGG ACCTCTCGGA CATGAAGCCC
GGTGCAGTTC TGGTGGACGT GGCGATCGAC CAAGGCGGCT GCTTTGAAAC CTCGCGCGCC
ACGACCCATG CGGATCCGAT TTATGAGGTG GACGGCATCA TGCATTACTG CGTTGCGAAT
ATGCCCGGCG CTGTCGCGCG CACTTCGACG CAGGCGCTCG GGAACGCCAC CCTGCCCTTC
TTGCTCGCGC TTGCGGACAA AGGCTGGCGA CAGGCCTGCG CAGATGACCC GCACCTGCTG
AACGGCCTGA ACGTGCATGC TGGCAAGCTG ACCTATTACG CGGTGGGCAG GGCGCTTGGT
CTTGATGTTC TATCACCGAG CCTTGCCCTG CGAGAGGGTA CCTAA
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| Protein sequence | MRIGCPTEIK PQEFRVGMTP DAAREAIAHG HQVMIQKGAG LGAGFPDEDY LAAGAAIIDT
AEEIFADADM IVKVKEPQAV ERKMLREGQL LFTYLHLAPD PEQTHDLLAS GCTAIAYETV
TDDRGGLPLL APMSEVAGRL APQVGAYTLQ KANGGRGVLM GGVPGVAPAK VVVVGGGVVG
THAAKIAAGM GADVTVLDRS LPRLKYLDDV FGGTFKNRYS TAGATAELIR DADMVIGAVL
IPGAAAPKLV SRADLSDMKP GAVLVDVAID QGGCFETSRA TTHADPIYEV DGIMHYCVAN
MPGAVARTST QALGNATLPF LLALADKGWR QACADDPHLL NGLNVHAGKL TYYAVGRALG
LDVLSPSLAL REGT
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