Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3623 |
Symbol | pheT |
ID | 4075050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 680579 |
End bp | 682975 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638005142 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_611852 |
Protein GI | 99078594 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.117267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA CACTCTCCTG GCTCAAGGAA CACCTCGACA CTGATGCAAG CGTCGAAGAG ATCACCGAGA CCCTGACTGA CCTTGGGCTG GAGGTCGAGG AGGTCGTGAA CCCGGCTGAC AAACTGGGCG CCTTCACCCT GGCCAAGGTG GTCGGTGCGG AGCAACACCC GGATGCCGAC AGACTGCGCG TTTGTCGCGT AATGACCGAC GAGGGCGAAA AGCAGATCGT CTGTGGTGCG CCCAATGCAC GCGAGGGCAT AACCGTGGTG CTCTGCAAAC CCGGCGACTA CGTTCCTGGT CTGGATTTCA CGCTTTCAGT GGGCAAGATC CGTGGTGTCG AGAGCCACGG CATGATGGCT TCGTGGAAAG AACTGACGCT CGGCGAAGAC CATGACGGTA TCGTTGAGCT CCCTTCGGGC GAGGTCGGCG ACAAGCTGGT GGACTGGCTT GCAGCGAATG ATCCAGCGAA GGTCGATCCG ATGATCGAGA TCGCGATCAC CCCGAACCGC CCTGACGCGC TTGGCGTTTA TGGAATCGCC CGTGACCTTG CGGCACGCGG TCTCGGGACG CTGAAGGCCA GTGACTACAA ACCGGTGGAA GGTCAGTTCG AGAGCCCCAT CAAGGTTACG ATTGACGAGG ACACCTTGGA CGGCTGCCCG CTGTTCACCG GTCGTGTGAT CCGCGGTGTC AAAAACGGCC CCTCACCAAA ATGGCTTCAG GATCGTTTGA CCGCGATTGG CCTGCGTCCA ATTTCTGCTC TGGTGGATAT CACCAACTTT TTCACCTTTG ATCAGAACCG TCCTCTGCAT GTGTTCGATG CTGCCAAAGT ATCCGGGAAC CTGCGTGTTC ATCGCGCGAC AGGCGGTGAA GAGCTGCTGG CGCTGGATGA AAAGACCTAC AAGATGCAGG CAGGCCAGAT GGTCATCTCC GATGACAATG GTCCCGAGAG CATTGCGGGC ATCATGGGCG GTGAAGAGAC TGGCTGCACC GATGAGACGG TTGATGTTTT CCTCGAAAGC GCGTTCTGGG ATCATGTGCA AATCGCGACC ACCGGGCGCG CGCTCAAGAT CAACTCCGAC GCGCGCTACC GCTTTGAGCG CGGGGTTGAT CCCGAGTACA CTTTCGAGGG CCTTGAGCGC GCAACCCAGA TGATCCTGGA TCTTTGCGGT GGGGAGGCTT CTGATGTGGT TTCCGCAGGG GATGTGCCGG ATCACGCGCG GTCCTATCGC TTGAACGCAG AGCGGGTGCA ATCGCTGGTG GGAATGGACA TTCCCGAGAG CGAGCAGCGC CAGACGCTGA CACGCCTTGG TTTCCGTCTC GAGGGCAATA TGGCCCATGT GCCGAGCTGG CGTCCGGATG TACAGGGAGA GGCCGATCTG GTCGAGGAAG TGGCGCGGAT TGCGTCGCTC ACCAAGCTGG AAGGTAAACC CTTGCCGCGC CTGACCGCTG GCATCCCCGC GCCCGTGATG ACACCGCAGC AGCGGCGCCT GCAGATGGCG CGTCGCACGG CGGCGTCGCT GGGCTATAAT GAAGTGGTGA GCTATACCTT CATCGACAAG GCCGCCGCGG GGCTGTTCGG CGGTGGAACA GATGAGACGA TGCTGGCCAA CCCGATTTCC TCGGAGATGT CGCATCTGCG CCCCGACCTC TTGCCGGGTT TGTTGCAGGC GGCGGCGCGC AACCAGGCGC GTGGTTTTGC GGATGTCTCC CTGTTCGAGG TGGGACCTGC CTTTACCGGC GGGGAGCCGG GCGAGGAACG CATCCAGATT TCGGGTCTTC TGGTGAACCG CAACGGCCCC AAGGACGTGC ACGGCGCCTC GCGCAACTGG GATGTTTTCG ATGCCAAGGC CGATGCCGAG GCTATCCTCG CAGCCATCGG AGCGCCCGCC AAGGTTCAGA TCCTGCGCGG CGGGGATGCC TGGTGGCACC CCGGTCGTCA CGGCCGGATC TGTCTTGGTC CGAAAAAGAC GCTGGGTGTC TTTGGCGAAC TGCATCCCAA AACCCTGAGC GAGCTTGGGA TCAAGGGGAC GGCCGTCGCC TTTACGATCT ATCCTGATGA GATCCCCTTG CCGCGCAAAT CTGGTGCAAG CCGCAGTGCG CTTGCTATCA GCGATCTACA GGCGGTGGAG CGGGACTTTG CCTTTGTGCT CGATTCAGAG GTCGAAGCGC TCACGGTTGT GAACGCAGCG GCAGGCGCGG ATAAAACGCT GATCGAAGAT GTGCGCGTCT TTGATGAATT CATTGGGGGG CCGCTTGGCG ACGGTAAGAA GTCCCTGGCG ATTGCGGTGA GACTGCAGCC CGCTGACAAG ACACTCACCG AAAAAGACAT CGAAGCCGTC AGCGAGAAGA TCGTCGCGAA AGTCTCCAAG GCGACCGGCG GCGTATTGCG CGGCTGA
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Protein sequence | MKFTLSWLKE HLDTDASVEE ITETLTDLGL EVEEVVNPAD KLGAFTLAKV VGAEQHPDAD RLRVCRVMTD EGEKQIVCGA PNAREGITVV LCKPGDYVPG LDFTLSVGKI RGVESHGMMA SWKELTLGED HDGIVELPSG EVGDKLVDWL AANDPAKVDP MIEIAITPNR PDALGVYGIA RDLAARGLGT LKASDYKPVE GQFESPIKVT IDEDTLDGCP LFTGRVIRGV KNGPSPKWLQ DRLTAIGLRP ISALVDITNF FTFDQNRPLH VFDAAKVSGN LRVHRATGGE ELLALDEKTY KMQAGQMVIS DDNGPESIAG IMGGEETGCT DETVDVFLES AFWDHVQIAT TGRALKINSD ARYRFERGVD PEYTFEGLER ATQMILDLCG GEASDVVSAG DVPDHARSYR LNAERVQSLV GMDIPESEQR QTLTRLGFRL EGNMAHVPSW RPDVQGEADL VEEVARIASL TKLEGKPLPR LTAGIPAPVM TPQQRRLQMA RRTAASLGYN EVVSYTFIDK AAAGLFGGGT DETMLANPIS SEMSHLRPDL LPGLLQAAAR NQARGFADVS LFEVGPAFTG GEPGEERIQI SGLLVNRNGP KDVHGASRNW DVFDAKADAE AILAAIGAPA KVQILRGGDA WWHPGRHGRI CLGPKKTLGV FGELHPKTLS ELGIKGTAVA FTIYPDEIPL PRKSGASRSA LAISDLQAVE RDFAFVLDSE VEALTVVNAA AGADKTLIED VRVFDEFIGG PLGDGKKSLA IAVRLQPADK TLTEKDIEAV SEKIVAKVSK ATGGVLRG
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