| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3616 |
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| Symbol | |
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| ID | 4075043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 670359 |
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| End bp | 671495 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005135 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_611845 |
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| Protein GI | 99078587 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0144381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAGAA CAGTTTTGTC CGCGCTCTTT CTCAGCCTAT CTGTTGTTCC TGCCCTTGCA
GAGACCCCGC GTGTCGTGAC CGACATTGCA CCCGTGCAGG GTCTGGTCGC TCGGGTCATG
GATGGCGTCG GCGCGCCAGA TGTTCTGGTT CCGCCCGGAG CGTCCCCCCA TGGGCATAGC
CTGAAGCCAT CGGATGCCCG CGCGTTGACT TCTGCGGATG CGGTGTTCTG GATCGGTGAC
GAATTATCGC CGTGGCTGCT CGGCTCGCTC AAAGAGCTCG CAGGGGATGC GCATGTGGTG
TCCCTACTCG CGGCACCGCA GACGATGCGG CTTGAGTTCC GCGAGGGGGT GGTTTTTGGT
GGGGCTGACC ACGATGACCA TGGCCACGAT GATCACGACC ACGATGCCCA CGAAGATCAT
GCTCACGACG GTCACGGGCA CGAAGAGCAC GATCATGATG ACCACAAGGG CCATGATGAT
CACGGTGCAC ACGACCATGA CGACCATGCA CATGATCAAG ACGCGCATGG TCACGATGAG
GATGCGCATG ACGCCCACGA TCACGACTCG CATGAGACCG CTCACGATGA CCATGGTCAT
GGTCATGACG ATCACGCTCA CGACGGGGTT GATCCGCATG CCTGGCTGGC ACCTGAAAAC
GGCAAGCAGT GGCTGGCCTT GGTTGCCGAT GAGCTGTCCG AGATCGATCC GGCGAATGCG
GACACCTATC AGAACAACGC GCGTGCGGGC CAAGCCGAAA TCGACGCAAT TGTTGCTGCC
ACAAAGGCAG ATCTCGGCGA AGCCCATGGG CAGTTCGTGG TATTCCACGA TGCATATCAG
TACTTTGAGC AAAGCTTCGG GCTTCGTGCT CTCGGTGCAA TTGCTCTTGG AGATGCTTCC
GACCCGAGCG TCGCGCGGAT CGCAGAAATG CGCGATGCGG TTGCTGGTCA AGAGGTCTCC
TGTGTGTTCT CTGAGCCGCA ATTCAATGCA GGTCTTGTAG ACACCGTCGC TGATGGGCTC
GACATTAAGG CCGTTGTGAT CGACCCGCTG GGGACCGAAA TCGCAACTGG GCCGTCGTTC
TATACAGATC TGCTGTCCGA GATTTCTGCA GGCTTCAAAA CGTGCCTGAC GCACTGA
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| Protein sequence | MPRTVLSALF LSLSVVPALA ETPRVVTDIA PVQGLVARVM DGVGAPDVLV PPGASPHGHS
LKPSDARALT SADAVFWIGD ELSPWLLGSL KELAGDAHVV SLLAAPQTMR LEFREGVVFG
GADHDDHGHD DHDHDAHEDH AHDGHGHEEH DHDDHKGHDD HGAHDHDDHA HDQDAHGHDE
DAHDAHDHDS HETAHDDHGH GHDDHAHDGV DPHAWLAPEN GKQWLALVAD ELSEIDPANA
DTYQNNARAG QAEIDAIVAA TKADLGEAHG QFVVFHDAYQ YFEQSFGLRA LGAIALGDAS
DPSVARIAEM RDAVAGQEVS CVFSEPQFNA GLVDTVADGL DIKAVVIDPL GTEIATGPSF
YTDLLSEISA GFKTCLTH
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