| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3590 |
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| Symbol | |
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| ID | 4075517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 638899 |
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| End bp | 640080 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005109 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_611819 |
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| Protein GI | 99078561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.453731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTATTC GCTGTATTTC GTTGACCTGC ATCGGTGTTC TGGCTGGGCT GTGGATTGCG
AGTTCCACAA CCGCGGTTCA GGCCTTCGAG ACCAAAGCCC GCGCCGCCTA TGTGGTGGAT
CAGGGGACCA ATACGGTTCT CCTGAGCAAG AATGCGGATG TGCCGATGCC GCCCGCATCC
ATGTCCAAGT TGATGACGCT CTATGTCGCT TTCGAGGCCG TCAGGGACGG GCGACTTACC
ATGGATGAGC GCCTTCCAGT GAGCGAGCAC GCCATGAGCT ACAAGGGCTC GACGATGTTC
CTCGACACCA CTGATCGGGT GCGCGTCGAG GATCTGCTGC GTGGCATAAT CGTGCTCTCT
GGCAATGATG CCTGCGCGGT GATTGCAGAG GCGCTCAGCC CCGATGGCAC CGAGGCAGGA
TTCGCGCGCT ACATGACACG CCGCGCGCGC GAGCTTGGCA TGAACGACAG CACCTTTATG
AACTCGAACG GATGGCCAGA TGATGGCCAC CGCATGTCGG TGCGCGATCT GGCCATTCTG
GCAGAGCATC TTATCGAGGA TTTCCCCGAA TTCTATCCTA TGTTCGCTGA GCAGGTGTTT
GAATTCGACG GCCGTGCGCC GTCAAATACA CGCAACCGAA ACCCGCTGCT GCAACTGGAC
ATCGGGGCGG ATGGGCTCAA AACCGGCCAC ACCCAAGAGG CTGGATATGG TCTTGTTGGC
TCTGCCAAAC AGGGCGACCG GAGGGTGATC TTTGTGATCT CGGGGCTGAA CAGTACGCCT
GAGCGCGCCG AAGAGAGCGA GGCGATCGTG AATTGGTCCT TCCGCCAGTT CACCAAGAAA
ACCATCGCGC GCGAGGGGAT CGCCGTCGAG CAGGCCGAAG TCTGGATGGG TGACAGCCCA
ACCGTCGGGC TGGTGCCCGC CGAGGATCTT GAGATCCTGC TGCCGGCGCT TTCCGATGAT
GCAGTGAAGG CCGAAGTTGT CTATACCGGC CCCGTTACCG CGCCGATTCA GGCCGGTCAG
CAGTTGGCGG AACTGGTTGT TCATCCCGAA GACCTTCCCG AAATGCGTTT GCCTCTGGTG
GCGCAAGCGG ATGTAGGGAC CGGGGGCTTT CCGGTGAAGG TCATGACTGC GGCCCGGGTT
TTGGTGCAGC GCTTTCTGAA CGGTCCTGAG GACGCAACGT GA
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| Protein sequence | MTIRCISLTC IGVLAGLWIA SSTTAVQAFE TKARAAYVVD QGTNTVLLSK NADVPMPPAS
MSKLMTLYVA FEAVRDGRLT MDERLPVSEH AMSYKGSTMF LDTTDRVRVE DLLRGIIVLS
GNDACAVIAE ALSPDGTEAG FARYMTRRAR ELGMNDSTFM NSNGWPDDGH RMSVRDLAIL
AEHLIEDFPE FYPMFAEQVF EFDGRAPSNT RNRNPLLQLD IGADGLKTGH TQEAGYGLVG
SAKQGDRRVI FVISGLNSTP ERAEESEAIV NWSFRQFTKK TIAREGIAVE QAEVWMGDSP
TVGLVPAEDL EILLPALSDD AVKAEVVYTG PVTAPIQAGQ QLAELVVHPE DLPEMRLPLV
AQADVGTGGF PVKVMTAARV LVQRFLNGPE DAT
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