Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3510 |
Symbol | |
ID | 4075189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 544384 |
End bp | 545889 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638005025 |
Product | dihydrolipoamide succinyltransferase |
Protein accession | YP_611744 |
Protein GI | 99078486 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) [TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.918883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.992852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG AAGTGCGCGT GCCCACTCTG GGCGAATCCG TGACCGAAGC CACCGTCGCC ACCTGGTTCA AGAAGCCGGG CGACACTGTT GCCGCAGACG AGATGCTCTG TGAGCTGGAA ACCGACAAGG TCACAGTCGA AGTGCCCGCC CCGGCGGCTG GCACTCTGGC CGAGATCGTT GCCAAGGAAG GCGACACCGT GGGCGTTGAT GCGCTCCTGG CCAATATTAC CGAAGGCGGC GCCGCAGCAG CCTCAGCCCC GGCAGCGAAA CCCGCCCCGG CTGAGGCACC TGCCTCTTCG GGTGGGGATG CTGTTGACGT GATGGTGCCG ACGCTGGGCG AAAGCGTCTC TGAGGCGACC GTTTCCACAT GGTTCAAGAA AGTCGGTGAC AGCGTCGCGC AGGACGAAAT GCTTTGCGAG CTGGAAACCG ACAAGGTTTC CGTCGAGGTG CCCGCGCCTG CCGCTGGCGT TCTGGCCGAG ATCACCGCGC CCGAAGGCAC CACCGTGGAC GCCTCTGCCA AACTCGGCGT CATCTCCGGT GACGGTGCAG CGGTAGCGGC GGCCCCGGCT GCAGCGCCCG CTGCGGCGGA GACCCCTGCC GCCGTCTCCA AGGATGTCGC CAATGCGCCA TCGGCGGAAA AGGCGATGGC CGAGGCCGGT CTCTCCGCAT CGGATGTCAA AGGCACAGGC CGCGACGGAC GCATCATGAA AGAGGACGTG GCATCGGCGA TCGCCGCCGC AAAATCCGCG CCCGCCCCGA CAGCGGCTCC CGCAGCCCCG CGCGCGCCGG TGTCTGCCGA TGATGCCTCG CGCGAAGAAC GCGTAAAAAT GACCCGTCTG CGCCAGACCA TCGCCAAGCG TCTGAAGGAC AGCCAGAACA CTGCTGCCAT GCTCACTACC TACAATGAGG TCGACATGAC CGAGGTGATG GCGCTGCGCA ACGAATACAA AGACCTGTTC CTGAAGAAGC ACGGCGTGAA ACTGGGCTTT ATGTCCTTCT TCACCAAGGC CTGCTGCCAC GCGTTGAAAG AGGTCCCCGA GGTCAACGCC GAGATCGACG GCACCGACAT CGTCTACAAG AACTTCGTCC ACATGGGCAT CGCCGCAGGC ACGCCCACGG GTCTGGTGGT TCCGGTCATC CGCGACGCCG ATGCGATGTC CTTTGCCGAT ATTGAGAAGG CGATTGCCGA AAAAGGCGCG CGCGCCCGTG ACGGCAAGCT GTCGATGGCG GAAATGCAGG GCGGCACCTT CACCATCTCC AACGGTGGTG TCTATGGCTC GCTGATGTCC TCGCCGATCC TGAACCCGCC GCAGTCCGGT ATCCTCGGCA TGCACAAGAT CCAGGACCGC CCGATGGCAA TCAACGGCAA GGTGGAAATC CGCCCGATGA TGTATCTGGC GCTGTCCTAT GACCACCGTA TCGTCGACGG CAAAGGCGCT GTGACCTTCC TCGTGCGCGT CAAAGAAGCG CTGGAAGATC CCCGCCGGTT GTTGATGGAT CTGTAA
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Protein sequence | MTTEVRVPTL GESVTEATVA TWFKKPGDTV AADEMLCELE TDKVTVEVPA PAAGTLAEIV AKEGDTVGVD ALLANITEGG AAAASAPAAK PAPAEAPASS GGDAVDVMVP TLGESVSEAT VSTWFKKVGD SVAQDEMLCE LETDKVSVEV PAPAAGVLAE ITAPEGTTVD ASAKLGVISG DGAAVAAAPA AAPAAAETPA AVSKDVANAP SAEKAMAEAG LSASDVKGTG RDGRIMKEDV ASAIAAAKSA PAPTAAPAAP RAPVSADDAS REERVKMTRL RQTIAKRLKD SQNTAAMLTT YNEVDMTEVM ALRNEYKDLF LKKHGVKLGF MSFFTKACCH ALKEVPEVNA EIDGTDIVYK NFVHMGIAAG TPTGLVVPVI RDADAMSFAD IEKAIAEKGA RARDGKLSMA EMQGGTFTIS NGGVYGSLMS SPILNPPQSG ILGMHKIQDR PMAINGKVEI RPMMYLALSY DHRIVDGKGA VTFLVRVKEA LEDPRRLLMD L
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