Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3504 |
Symbol | |
ID | 4075183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 540502 |
End bp | 541899 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005019 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_611738 |
Protein GI | 99078480 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.305711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCCT ATGACGTCAT CGTAATCGGC GCCGGTCCCG GCGGCTATGT CAGCGCAATC CGCTGCGCCC AGCTGGGCCT CAAGACCGCC ATCGTAGAAG GCCGCGAAAC CCTTGGCGGC ACCTGCCTCA ACGTGGGCTG CATCCCCTCC AAGGCGCTCT TGCACGCAAC CCATATGCTG CATGAAGCAG AGCACAACTT CGGCGCCATG GGTCTCAAGG GCAAAAGCCC CTCGGTCGAC TGGAACCAGA TGAAATCCTA CAAGGATGAG GTCATCGGCC AGAACACCGG CGGTGTCGAG TTCCTCATGA AGAAGAACAA GATCGACTGG ATCAAGGGCT GGGCGTCGAT CCCCGAGGCG GGCAAGGTCA AAGTGGGCGA CGACACCCAT GAGGCCAAGA ACATCATCAT CGCCTCCGGC TCCGTGCCCT CCGCCCTGCC GGGTGTCGAG GTCGACAACG ACAAGGGCCT TGTGGTCGAC AGCACCGGCG CTCTGGAACT GCCCAAAGTC CCGAAGAAAA TGGTCGTGAT CGGCGCAGGC GTCATTGGCC TCGAGCTCGG CTCGGTCTAC GCGCGCCTTG GCGCAGAGGT CACCGTGGTC GAATATATGG ACGCGGTCTG TCCCGGCATG GACAAGGACG TCCAGCGCGG CTTCAAACGC ATCCTTGAAA AGCAGGGCCT CAGCTTCATC ATGGGGGCCG CCGTCAAGGG CGTTGAAACC ACGAAATCCA AGGCCAAAGT CTCTTATGAG CCCAAAAAAG GCGGCGACGC AGAGGTCATC GAGGCCGATG TGGTGCTCGT CGCCACGGGG CGCAAACCCT ATGCCGAAGG CCTTGGCCTC GACGCGCTTG GCGTCAAGAT GACCGAACGC GGCCAGATCG CCACCGACGC GCAATGGGCC ACGAACGTCA AAGGCATCTA CGCCATCGGC GACGTCATCG AGGGTCCGAT GCTCGCGCAT AAGGCCGAAG ACGAAGGCAT GGCCGTGGCC GAAGTGATCG CGGGCAAACA TGGCCACGTG AATTACGGCG TCATTCCCGG TGTGGTCTAC ACCACCCCAG AGGTGGCGAC CGTCGGTGCC ACCGAAGACG CGCTCAAGGC CGAAGGTCGC AAGATCAAGG TGGGCAAGTT CATGTTCATG GGCAACGCCC GCGCCAAGGC CGTGCATCAG GCCGAGGGTG GTTTTGTGAA ACTGATTGCC GACAAGGAAA CCGACCGCAT CCTCGGTGCG GCCATCATCG GCCCCGGTGC AGGCGATCTG ATCCACGAGA TCTGTGTGGC GATGGAATTT GGCGCCTCCG CCGAGGATCT GGCGCTGACC TGCCACGCGC ATCCGACCTA TTCCGAGGCC GTGCGCGAAG CAGCCCTTGC CTGCGGCGAC GGCGCGATCC ACAGTTAA
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Protein sequence | MASYDVIVIG AGPGGYVSAI RCAQLGLKTA IVEGRETLGG TCLNVGCIPS KALLHATHML HEAEHNFGAM GLKGKSPSVD WNQMKSYKDE VIGQNTGGVE FLMKKNKIDW IKGWASIPEA GKVKVGDDTH EAKNIIIASG SVPSALPGVE VDNDKGLVVD STGALELPKV PKKMVVIGAG VIGLELGSVY ARLGAEVTVV EYMDAVCPGM DKDVQRGFKR ILEKQGLSFI MGAAVKGVET TKSKAKVSYE PKKGGDAEVI EADVVLVATG RKPYAEGLGL DALGVKMTER GQIATDAQWA TNVKGIYAIG DVIEGPMLAH KAEDEGMAVA EVIAGKHGHV NYGVIPGVVY TTPEVATVGA TEDALKAEGR KIKVGKFMFM GNARAKAVHQ AEGGFVKLIA DKETDRILGA AIIGPGAGDL IHEICVAMEF GASAEDLALT CHAHPTYSEA VREAALACGD GAIHS
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