| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3465 |
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| Symbol | |
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| ID | 4075099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 489126 |
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| End bp | 489983 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004974 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_611699 |
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| Protein GI | 99078441 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.847127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTG CCACCTACAC CGCCGCGACT GAAACCTTTT ACGGTGTCAT CACCGACGCA
GGCGCAATCG CCCTATCGCC GGAGTTCCCC GAGTGGCCCA CCCTACGCGA AGTGATTGAA
AACAAGGGTC TTCACACCCT TGCCCAAGCG GCGAAGGGGC GGGATGTGAC CCATCCACTC
GACCAGATCA CCTATCAGAT CCCGGTGCCC CGCCCGGAAA AAATCATCTG CGTTGGTGTC
AACTTTCCCA ACCGCAACGC GGAATATAAG GACGGACAGG ACGCCCCCCC CAACATGTCG
CTGTTTCCAC GATTTGCGCG CAGCTTTACC GGGGCGAACC ACCCGCTGAT CCGCCCGCCG
GAAAGCCCGC AACTGGATTA CGAGGGCGAG ATCGCCATCG TCATCGGCAA GGGCGGACGC
CGCATTTCTG AGGCAGACGC CTATGACCAC ATTGCCGCGA TAACCCTCTG TAATGAAGGC
ACAATCCGCG ACTGGGTGCG CCATGCCAAA TTCAACGTGA CGCAGGGCAA GAACTGGGAC
AGCTCCGGTG CCATCGGCCC GTGGCTGGTG CCCTTTACCG CGCCCGCGCA GCTTGATGAC
GTGCGCATCA CCACCAAGGT CAATGGCGAG TTGCGTCAGG ATGATCGCAC CTCCCGGATG
CTGTTCCCGA TCCGCCGTCA GATCGCCTAT ATCTCCACCT TTACCACGCT GGTTCCGGGC
GACATCATCG TCACCGGCAC CCCCACCGGC GCAGGCGCAC GGTTTGATCC GCCAAAGTTC
CTCAAACCCG GCGACGTGAT CGAGGTCGAG GGTGAAGGCA TCGGCATTCT GCGCAACGCA
GTAGAGGATG AGGCATGA
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| Protein sequence | MRFATYTAAT ETFYGVITDA GAIALSPEFP EWPTLREVIE NKGLHTLAQA AKGRDVTHPL
DQITYQIPVP RPEKIICVGV NFPNRNAEYK DGQDAPPNMS LFPRFARSFT GANHPLIRPP
ESPQLDYEGE IAIVIGKGGR RISEADAYDH IAAITLCNEG TIRDWVRHAK FNVTQGKNWD
SSGAIGPWLV PFTAPAQLDD VRITTKVNGE LRQDDRTSRM LFPIRRQIAY ISTFTTLVPG
DIIVTGTPTG AGARFDPPKF LKPGDVIEVE GEGIGILRNA VEDEA
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