| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3449 |
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| Symbol | |
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| ID | 4075083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 473527 |
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| End bp | 473868 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004958 |
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| Product | protein of unknown function DUF861, cupin_3 |
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| Protein accession | YP_611683 |
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| Protein GI | 99078425 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.668724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACT TTGAACGCCT CACCCCCGCC GCAGCCACCC CCGAAGAGGA ACGCCCCGCG
CCGGAAAAGC TGCTGGCTGG TGATCCCGTC TTCACAACGT GGAATGTGGA GGAGGTGGAC
GGGCTATATT GCGGCATCTG GCAGTCCACG CCGGGAAAGT GGCGGATTTC GTACGATGAA
TGGGAATACT GCCGCATTCT CGAAGGGCGC TCCATCATCA CCAGTGAGGA TGGCACTGAA
TATCCGCTGA GCGCAGGCGA CAGTTTCATC CTGCGTCCCG GATTCAAGGG CACATGGGAA
GTTCTTGAAA CCACCCGCAA GGACTATGTG ATCCGTCTGT GA
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| Protein sequence | MTHFERLTPA AATPEEERPA PEKLLAGDPV FTTWNVEEVD GLYCGIWQST PGKWRISYDE
WEYCRILEGR SIITSEDGTE YPLSAGDSFI LRPGFKGTWE VLETTRKDYV IRL
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