Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3413 |
Symbol | |
ID | 4075587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 434778 |
End bp | 435386 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638004922 |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | YP_611647 |
Protein GI | 99078389 |
COG category | [C] Energy production and conversion |
COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.33701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.444883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGGCT TACTGTCCCT CGCGGTCAAG GCGATCTTTG TTGAGAACCT GGCCCTGTCG TTCTTCCTTG GCATGTGTAC CTTCCTGGCG GTGTCCAAGA AGATCTCCAC TGCAATCGGT CTTGGGGTTT CGGTCATGCT GGTGCAGGGC ATCACCGTGC CTGCAAACAA CCTGATCCTG ACCTACCTTC TGGCGCCGGG CGCACTGGCC TGGGCCGGGT TTGGCGATGT GGATCTGACC TTCCTGGGTC TGATCTCATA CATCGGTGTG ATCGCGGCCA TGGTGCAGAT CCTCGAGATG CTGCTCGATA AGTATTTCCC GCCGCTTTAC AACGCCTTGG GTGTGTTCTT GCCGCTCATC ACCGTGAACT GCGCGATCCT TGGGGGCTCG CTCTTCATGG TGGAACGCAA CTATGATTTC GCCGAGGCGG CGACATATGG TCTCTCGTCC GGGTTTGGCT GGGCGCTGGC GATCACCGCC ATGGCGGGCG TGCGCGAGAA GCTCAAATAC TCTGACATTC CCGACGGGCT TCAGGGTCTC GGCATCACTT TCATCACCGC AGGTCTGATG GCGCTGGCCT TCATGTCCTT CAGCGGCGTG AAACTCTGA
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Protein sequence | MEGLLSLAVK AIFVENLALS FFLGMCTFLA VSKKISTAIG LGVSVMLVQG ITVPANNLIL TYLLAPGALA WAGFGDVDLT FLGLISYIGV IAAMVQILEM LLDKYFPPLY NALGVFLPLI TVNCAILGGS LFMVERNYDF AEAATYGLSS GFGWALAITA MAGVREKLKY SDIPDGLQGL GITFITAGLM ALAFMSFSGV KL
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