| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3407 |
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| Symbol | |
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| ID | 4075581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 427302 |
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| End bp | 428594 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004916 |
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| Product | initiator RepB protein |
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| Protein accession | YP_611641 |
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| Protein GI | 99078383 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.835339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC AAAGCTTTGA TGGAGACCGG CTGAGTGGCG CCTTAAGCCG AGAGACGGTG
AAAAAGAACG TAGCGGCGAT CCATATCAGC GGCAAACTCA CCCTGCTTCA ACGCAAGTTG
TCAAATGTAT TGTTGCTCAA CGCCTATGAC TCTCTGACGT CTGCCCGCAG TCATACGATC
GATGCGCGCA CACTTGCGAT GATGGTCGGC TACAACTCCA ACGACGTAGA CAGCCTGCGC
GCAAGTCTCA GGGCCTTGGC CGAAACCGTC GCGGAATGGG ATATGCTGGA TGAGCAGGGG
CATCAGGAAT GGGGTGTGTC GGCGCTCTTG AGTTTTGCGA AGCTCAAGAA CGGCGTTTGC
GAGTACGCAT ATTCTCCTGC GCTTGCCCAG AAGCTACATG ACCCGAAGAT CTACGCACTG
ATCAATGTGA AGATCCAACG GAACTTTACA TCTGGCCACG GTCTCGCGCT CTATGAGAAT
TGCTATCGGT TTGTCAGGAC GGGCTCCACG GGGTGGTGGA GCCTGGATAT CTTTCGCAAA
CTCATGGGGG TCGATGGCTC CTCATATTAC GAGAGTTACA AGCACCTAAA CGCGAAGATC
ATCAAACCCG CTGTCGCGGA GGTGAACAAG AGCTCTGATA TCATCATCGA ACCGCAGACC
CGCAAAAAGG GGCGGTCGGT GAGCGACATT CGCTTCATCA TCAAGGAAAA TCCCCAGATG
GCGATGTTCC AGATTGATGA CAGTGAAGGG CTGCGCAATC TGGCGGTCTA CAAGGCGTTG
CGCGGGCAGG GGGTGTCTGA CCGTTTGGCG CGGCAGTGGA TCACAGAACA TGGGCAGGAC
TATGTGCAGG AGAAACTCGA CTATGTTGCG GGGCAGGGCG AGGTGAAATC GAGTGTCGGC
TATCTCAGAG CCGCGATCCT TGGCGACTAT AGTGCGCCAG AGACCACAAA GGGGACGGTT
CAGAAAAAGG TCGATCCCGA AACACAGGCG AAACTCGATG AACTTCAGCG TGCCCGAGAG
GCAGAAAAAG CGGCGGAGGA CGCTGCGTTC AAGGCCCGCG CCGCGGAGCG TCGTGAACGC
GCGAAACACT TGGACATCGT TGAGACACTG GTTTCGCGGC GAAACCCTAC ACAGAAAGAT
GCGGACAAAC GGCTGTTTGT CTCTCGGTTG GAAAGCGATC TGGACCGGGA GCATTTTCGC
CAACACGGCT GGCGCTCCGC TCTGAATGCG GCGGCGATCA TTTCTTTCTG GCAGGAGTTG
GAGCCTGATG CCTTTGCCGA GGACGTGGAA TAG
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| Protein sequence | MADQSFDGDR LSGALSRETV KKNVAAIHIS GKLTLLQRKL SNVLLLNAYD SLTSARSHTI
DARTLAMMVG YNSNDVDSLR ASLRALAETV AEWDMLDEQG HQEWGVSALL SFAKLKNGVC
EYAYSPALAQ KLHDPKIYAL INVKIQRNFT SGHGLALYEN CYRFVRTGST GWWSLDIFRK
LMGVDGSSYY ESYKHLNAKI IKPAVAEVNK SSDIIIEPQT RKKGRSVSDI RFIIKENPQM
AMFQIDDSEG LRNLAVYKAL RGQGVSDRLA RQWITEHGQD YVQEKLDYVA GQGEVKSSVG
YLRAAILGDY SAPETTKGTV QKKVDPETQA KLDELQRARE AEKAAEDAAF KARAAERRER
AKHLDIVETL VSRRNPTQKD ADKRLFVSRL ESDLDREHFR QHGWRSALNA AAIISFWQEL
EPDAFAEDVE
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