| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3309 |
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| Symbol | |
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| ID | 4075713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 317847 |
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| End bp | 319181 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004817 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_611543 |
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| Protein GI | 99078285 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.581632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.566627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATT TCACTTTTAC ACGCCGCGAC TTTCCAGGGG ATTTCCTGTT CGGCTGCGCG
ACGTCTTCCT ATCAGATTGA AGGCCATCAA TATGGCGGCG CAGGGCCGAC CCATTGGGAT
AGTTTTGCCG CAACACCCGG CAATGTGGTG CGTTCTGAGG ATGGCGCACG CGCCTGTGAC
CACTACCACC GCTTTGAGGA GGACCTCGAT CTCGCCGCTG CAGCGGGGTT TGAGTGCTAT
CGGTTCTCGA CCAGTTGGGC ACGCGTGCTG CCCGAGGGGC GTGGCACGCC CAATGCCGAG
GGGCTCGATT TCTACGACCG GCTGACCGAC GCGATGCTCG AACGCGGCCT GAAGCCCTGC
GCGACGCTCT ACCACTGGGA GCTGCCGCAG CCACTGGCCG ACATGGGCGG CTGGCGCAAT
CGAGATGTAA GCAACTGGTT TGCCGAATTC ACCGAAGTCA TCATGTCCCG GATCGGCGAT
CGGATGTATT CCGTGGCACC CATCAACGAA CCCTGGTGCG TTGGGTGGCT TTCGCATTTT
CTGGGCCATC ACGCGCCCGG TCTGCGCGAC ATCCGCGCCA CCGCACGGGC CATGCACCAT
GTCCTGTTGT CCCATGGCCG CGCCATCGAA GTGATGCGGG GCCTTGGAAT GAACAACCTT
GGTGCGGTGT TCAATTTTGA ATGGGCGGAG CCGCTGGATC AGAGTGCCCA AGCTCAGGCC
GCGGCAGAAA CCTATGATGC GATCTACAAC CGCTTTTTCC TCGGCGGGGT CTTTAAAGGC
GCTTATCCCG AAGCAGCCTT GCGCGGGCTC GAACCCCATT TGCCGCAGGG CTGGCAGGAC
GATTTCGCCA CCATCACCCA AAAGGTCGAT TGGTGCGGTT TGAACTATTA CACTCGCAAG
GTGATCGGTC CAGACAATGG CCCCTGGCCC CATTACGCAG AGCTGGTGGG CGAACTGCCC
ACGACCCAGA TGGGGTGGGA GATTTATCCA GATGGGCTTT ACAAGTTTCT GAAGCGCACA
GCCGAAGACT ACACCGGAGG TCTGCCGCTC ATCGTGACCG AGAACGGCAT GGCAAACCCG
GATGTGCTTC TGGAGGGCGA GGTGCCGGAC GCAGCCCGCA TCGCCTACGT TGAGGCACAC
CTTGCGCGGG TACGCCAAGC GATTGCAGAG GGCGTCCCGG TGAAGGGTTA CTTTCTGTGG
TCACTTCTCG ACAATTACGA ATGGGCGCTC GGGTACGAGA AACGCTTTGG TCTGGTGCAT
GTCGACTTTG AGACGCTGAA GCGCACGCCG AAGGCCTCTT ATCGTGCCTT GCAACGTGCG
CTTACCGCAT CCTGA
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| Protein sequence | MTDFTFTRRD FPGDFLFGCA TSSYQIEGHQ YGGAGPTHWD SFAATPGNVV RSEDGARACD
HYHRFEEDLD LAAAAGFECY RFSTSWARVL PEGRGTPNAE GLDFYDRLTD AMLERGLKPC
ATLYHWELPQ PLADMGGWRN RDVSNWFAEF TEVIMSRIGD RMYSVAPINE PWCVGWLSHF
LGHHAPGLRD IRATARAMHH VLLSHGRAIE VMRGLGMNNL GAVFNFEWAE PLDQSAQAQA
AAETYDAIYN RFFLGGVFKG AYPEAALRGL EPHLPQGWQD DFATITQKVD WCGLNYYTRK
VIGPDNGPWP HYAELVGELP TTQMGWEIYP DGLYKFLKRT AEDYTGGLPL IVTENGMANP
DVLLEGEVPD AARIAYVEAH LARVRQAIAE GVPVKGYFLW SLLDNYEWAL GYEKRFGLVH
VDFETLKRTP KASYRALQRA LTAS
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