| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3305 |
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| Symbol | |
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| ID | 4075709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 312880 |
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| End bp | 314028 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004813 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611539 |
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| Protein GI | 99078281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.076259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.533019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAA TCGCAGGACA AAAGCCTGGC CTGATGTGGG CGCTTCGCAT CTCTGTCATC
GTGTTGGTTG GCCTCTGGCT GTTTCCGACG CTGGGGCTGC TGGTGTCGTC GTTCCGCACC
GGTGATCAGA TCGCCACATC CGGTTGGTGG AAGGCTTTGT TTCCCACCGA GCAGAACCAG
ACGCTGCGCA CAGCTGCGCC AGAAACACAG GTGCAGGTGG GTGACCTCTG GGTGATCGAA
GGTAATCTCT TTGAGGGCGA AACTTCGGCC GAAATCTCTG TCTGGGGCAC CAATGCCCGC
GAGATTGACG CCTACAGCGC GGGAGAGACC GCGACCCTAC GCGGCGGTGA AGAGCTGACC
GTCGAGGCAG ATGGAAGCTA CCGGATGACC TCCTCCACCG AAATGGAAGG ACGCCGGGGC
GCGCGGGTCT TTGTGACTGC TGTTGTGCCC CCAGAGTTCA CAGTTGAGAA CTATGAGACG
ATCCTGATTT CAGGTGGGTC TACCGACAAC ATGGCGCGGG CCTTTTTCAA TACGCTCACC
GTGACGATCC CGGCGACGAT TATTCCGATC CTTGTGGCGG CTTTTGCAGC CTATGCGCTG
GCGTGGATGG AATTCCCGGG CCGCGCGCTG CTGATTGCGG CCATCGTGGG CCTTTTGGTG
GTGCCCTTGC AGCTGGCGTT GATCCCGCTC TTGAAGTTTC ACAACGAGAT CGGCATCGGC
AAAGGCTACC TCGGAGTCTG GATGGCGCAT ACCGGCTTTG GCTTGCCTCT CGCGATCTAT
CTCTTGCGCA ACTACATGGT CGGCATACCG CGCGACATCA TCGAGAACGC GCGGGTGGAT
GGGGCGACCG ACTTTCAGAT CTTCACCCGG ATCATTTTGC CGCTTTCTTT CCCGGCGCTC
GCCTCCTTTG CGATTTTTCA ATTCCTCTGG ACCTGGAACG ACCTTCTGGT GGCCATGGTA
TTCCTGATTG ACGCGACTGG CGAAACAACG GTGATGACCA AGCAGATCGT CGAGCTTCTT
GGCACCCGCG GCGGCAATTG GGAAATCCTC GCCACCTCGG CTTTTGTTTC CATCGCCGTG
CCGCTTGCCG TTTTCTTTGC CATGCAGAAG TACCTCGTGC GCGGGCTACT GGCCGGGTCG
GTCAAATAG
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| Protein sequence | MNAIAGQKPG LMWALRISVI VLVGLWLFPT LGLLVSSFRT GDQIATSGWW KALFPTEQNQ
TLRTAAPETQ VQVGDLWVIE GNLFEGETSA EISVWGTNAR EIDAYSAGET ATLRGGEELT
VEADGSYRMT SSTEMEGRRG ARVFVTAVVP PEFTVENYET ILISGGSTDN MARAFFNTLT
VTIPATIIPI LVAAFAAYAL AWMEFPGRAL LIAAIVGLLV VPLQLALIPL LKFHNEIGIG
KGYLGVWMAH TGFGLPLAIY LLRNYMVGIP RDIIENARVD GATDFQIFTR IILPLSFPAL
ASFAIFQFLW TWNDLLVAMV FLIDATGETT VMTKQIVELL GTRGGNWEIL ATSAFVSIAV
PLAVFFAMQK YLVRGLLAGS VK
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