| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3277 |
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| Symbol | |
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| ID | 4075681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 277819 |
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| End bp | 280044 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004786 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_611513 |
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| Protein GI | 99078255 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGTC TTGCGAACTT AGACGTGAAC TTGGCTTCCG GCGCTGCTGC TTCGCTATGG
GTGGTCTGCT CGATTGTTCT GATCCGGATC GCGAGAAACA TTCCTTTTTC AGGTCAGCTC
TCCTTTGTGC TGACCCTGGC GGCGATGCTG TGGTGGCTCT TCACTGTTAT CTTTGACCTC
GCGTCGCAAA GCGAAGCTTG CAAGGTCGCA TGGTCATTGG CGGCCTGGCC CGGGATCGTG
CTCGTGCCCG TGGCCTGGAG CTTTTTTGTC TTCGACTACA CGATGAACAG CTGTCGGACC
CGCCGCCCGT TCCGGTTGCT GATCTATATC GGCCTTCCGA GCCTTGTCAG TGCGATTGCC
GTGACCAACC ACTGGACGCA TCTGCTCTAT GGACCGGACA CCCGCCTTGT GATCGAGGGC
GGGGATAGCT TTGTCATTTT TGACCATGGG CCGCTGTTTT TTGCGGTCGC CGCGACACTC
TATGTCTTTT TGATGATCGC CTTGGGTCTG CTCGGTTTTG CGTTTCTCAA GGCAAAAAAG
ATCTTTCGGC CCTTCATGGG CGCCCTGATT ATTATTACGG CGGCTCCGGT TGTGGCCAAC
CTGGCCTATA TCGGGTGGGG GGTCACGGTG TTTGGTTTCG ACCCGACCCC GTTCACCTTT
GCGGTGTCCC TCATCGCACT GAGCTGGCTG CTGGTGAACA ATTCGATGAT GGATACGGCG
GCTCAGGGGC GGACCCTGAT GTTCTACGCC ACGCAGGATC CTGTGATCCT GGTTGATGCT
GGCGGACAGT TTGTCAGTGC CAACCCGGCC GCAAGACAGC TGATTGGCGA TCGCATTCCA
GATTATGGCG AACCCATAGA GCAACTGCCC GAAGTCGGGC CGCTGGTCAA GGATCTCGTC
AAAGCGGGTG GCCTCGGCAA ACCCGGGCCG ATCAGGCTGG CCGGACGCGC CTTTGACCCG
CGAGCAGTTC CGATCGACAG CCCGATCCAA GCCCAGATCC CCCTTCTGGG CTGGTGCATT
TCTCTGGTCG ACATCACCGA AAGAGAACGC GCCGCCGAGG CTCTGCGCGA AGCCCTGTCA
CTGGCGGAGG CCGCAAACCG TGCAAAAACT CAATTCCTCG CCAATGTGAG CCATGAAATC
CGCACACCGC TGAATGGTGT GCTGGGCATG GCGTCTGTTC TGGGGGAAAC CAAGCTCGAT
GAAGAGCAGC AGGAGTTTTT GCAGGTTATC GAGGACTCCG GGCAGGTGTT GCTGACAACG
ATTGGCGATG TCCTTGATCT TTCAAAAGTC GAAGCGGGCA AGATGACGCT CGAGACCAAA
CCGTTCACAC TGCGCAATGC GCTTGAGGGG GCGCGTGCAT TGTTTTCCGC CCGCGCCAAG
GAAAAGGGCA TCGGTCTGCA TCTCGAGATG CATGATGATC TGCCACGGGT CATCTTGGGA
GATGATCACC GGTTTCGTCA GGTTGTTCAC AACCTCGTAT CGAATGCGAT CAAGTTTACC
GAAACGGGCG CTGTCACCAT TTCTGCCGCA CCGGCGGAAA ATGGGTCGAT CCTTCTGGTT
CGCGTCAGCG ACACAGGGCC GGGGATACCC GCCGAGGCGC GGGATATGAT CTTTCAGCCC
TTCCAGCAGG TCGAAGGCGG TGATGCGCGC AAATTCGGGG GGACCGGCCT TGGGCTTTCG
ATCTCTCGCC AGCTTTGCCA CCTGATGGGA GGCAGCCTGC AAGTGGCTGA TGATGAACCG
CAGGGCGCGA CGTTTGAAAT CAGACTGCCG CTCCTTCCCG CCAATGAGGC GCAAGAGCTC
CTCTCGCAGC CCGCATCAGG CGCGGTGTCG GTGCCTCATG GCCCGGCGCT CGATGTGCTT
GTGGTCGACG ACAACCGTAC CAACAGGCTG ATCCTCGAAA AGTTCCTCTC CTCCACACCT
TACCGCGTCA AATCCGTCTC CAATGGGCAA GAGGCCATTG GCCTTGTGCA TTCGTTTTCC
TTCGATGTCA TCTTGATGGA CATTCAGATG CCGCGAATGG ATGGCGTGGA GACCACGCAG
AAAATCCGTT CCATTGAACA GGCGAAGGGT CGCGAGCCCA GCTTTATTGT CGCAGTGACT
GGCAATGCGA TGCCCGAGCA ATTGAGCCAC TACCTTTCGG TGGGCATGGA TGATGTGCTG
GCAAAACCTG TCTCAAAAAC GCTTCTACTC TCACTGATCC GCGAGATCCG GCGAGAGGTT
GCCTAG
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| Protein sequence | MNCLANLDVN LASGAAASLW VVCSIVLIRI ARNIPFSGQL SFVLTLAAML WWLFTVIFDL
ASQSEACKVA WSLAAWPGIV LVPVAWSFFV FDYTMNSCRT RRPFRLLIYI GLPSLVSAIA
VTNHWTHLLY GPDTRLVIEG GDSFVIFDHG PLFFAVAATL YVFLMIALGL LGFAFLKAKK
IFRPFMGALI IITAAPVVAN LAYIGWGVTV FGFDPTPFTF AVSLIALSWL LVNNSMMDTA
AQGRTLMFYA TQDPVILVDA GGQFVSANPA ARQLIGDRIP DYGEPIEQLP EVGPLVKDLV
KAGGLGKPGP IRLAGRAFDP RAVPIDSPIQ AQIPLLGWCI SLVDITERER AAEALREALS
LAEAANRAKT QFLANVSHEI RTPLNGVLGM ASVLGETKLD EEQQEFLQVI EDSGQVLLTT
IGDVLDLSKV EAGKMTLETK PFTLRNALEG ARALFSARAK EKGIGLHLEM HDDLPRVILG
DDHRFRQVVH NLVSNAIKFT ETGAVTISAA PAENGSILLV RVSDTGPGIP AEARDMIFQP
FQQVEGGDAR KFGGTGLGLS ISRQLCHLMG GSLQVADDEP QGATFEIRLP LLPANEAQEL
LSQPASGAVS VPHGPALDVL VVDDNRTNRL ILEKFLSSTP YRVKSVSNGQ EAIGLVHSFS
FDVILMDIQM PRMDGVETTQ KIRSIEQAKG REPSFIVAVT GNAMPEQLSH YLSVGMDDVL
AKPVSKTLLL SLIREIRREV A
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