Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3245 |
Symbol | |
ID | 4075387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 247832 |
End bp | 249418 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638004754 |
Product | CheW protein |
Protein accession | YP_611481 |
Protein GI | 99078223 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.128469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAG ACGTATATGA TTTGTCCGAC CATGCCTTGC CTTGCGCGGA AGCTGGCCGA TCTCCTGCTG AGCCTTCCGA TGCAGTTGAA GCAAGTGCTT TTGCAGATCC CTTGTCGGAA AGCGCCAGAG AGATCGAGAC TTTTGGCTCC TTCCTGATCA AAGATATGGA GTTCGCTCTG CCGGTCAGCG TGATCCAAGA AGTTGTGAAC GAACCCGAAG ACGTTTCGCC GGTACCGCTG TCCCCGTCCT ATATGATCGG CCTGTTCAAT CTTCGCGGCA TGATTGTTCC AATGGTCGAT CTGCGCCAGA TTTTCGGCCT GCCAGCCGCA GAGAGCCGAG GCGGGCGAAA GATTGTCATT ATCGAAGACG GAGAAAAGCA TCTGGGGTTG GTCTTTGATC GCACCGGAGA AGTGGTCCAC GCGCGCCGAG CGGAACGCGT TGCCTTTCTC TCCCGAGAAA ATGGGATCAA GGATGTGATC TCCGAAGGGG TTCTGAAGCT CGATAACGGG CGCAGGCTTT TGCAGGTACT GGACCCATAT GCGGTTCTCA AGTTGGAAAA AGTTCCGCGC CTCGCCAAAG ATGAACCCCT CGCCCGTCGC CGTGCTGCGA AAGGCGCGCG GAAACACTGC GTATCTTTTG AAGTCGGTCA CAGCAAATAC GCCTTTGACC TGGAGCATGT TCAGGAAGTC TTGGAGGTGC CGGAGATCAG ACACTCGGTA TTCACGAGCG GGCATATTCT GGGCACGATC GATCTGCGTG GTCGTATCGT CCCCGTCGTC GATTTTCGCG GCTTTGTCGG AAAGCAGCGC ACTGACAGTC GGCAAGTCGC AGCCTCCAGA TCAAAGAAGC TGCTCATCAT GAACCTTCTG AGAGGACAGA TCGGGCTATT GGTCTACTCC ATCGACAATA TCGTTCAATA CTACGATGAA GACGTGATGC CGATTTCAAA ACTCGCCATG CCTCACGAGG CAATTTTCAA AGGCTGTATC GCGTTTGATA ACAGTGAATT GATCATGCTT TTTGATCATG AAGAGACCAT GAAACAGCCT GATCTGGTCG CTGCGGCGCA GTGTTGCCAG GAACTCTATC CCGGGGCAAT CACAGAAAAC GTTGAACAAG ACACCCCATC AAAACAGCGC CGCACATTCA TTACCTTCAG CGCGGATACG CGCTTTGCGA TGGATATTAC CAAAGTGCGC GAAGTGATTG AATCTCCATG TGATTTAATG AAGCCTCCAA ATGTTGCAAA GTCAGTGGCG GGGCTTTTCA ACCTTCGGGA GGAGATCATC ACACTGTTGG ATCTTCGTAT TTTATACGAC CTAAAGGAAA CTCAGACGAC GCATCAGAAG GTTGTGATTT TTCAATCTGA GGGTCAAAAG TACGGGATAC TCGTCGATAC TGTGAATGAA ATCATTATGA CCACAGCCGA CAGGGTGCTG CCATTCCAAG CTTCAACGGC GCGGGGCAAC ACAGCCGTGC ATGAAGACGT GAGCGAAATG GTACAGGTTG CAGGAGGGAA CAATCAGTCT GTCTCTACGA TGGTTCTCGA CGTCGATGCC CTAGTTCGTC ATACGATCGA TCACTGA
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Protein sequence | MTEDVYDLSD HALPCAEAGR SPAEPSDAVE ASAFADPLSE SAREIETFGS FLIKDMEFAL PVSVIQEVVN EPEDVSPVPL SPSYMIGLFN LRGMIVPMVD LRQIFGLPAA ESRGGRKIVI IEDGEKHLGL VFDRTGEVVH ARRAERVAFL SRENGIKDVI SEGVLKLDNG RRLLQVLDPY AVLKLEKVPR LAKDEPLARR RAAKGARKHC VSFEVGHSKY AFDLEHVQEV LEVPEIRHSV FTSGHILGTI DLRGRIVPVV DFRGFVGKQR TDSRQVAASR SKKLLIMNLL RGQIGLLVYS IDNIVQYYDE DVMPISKLAM PHEAIFKGCI AFDNSELIML FDHEETMKQP DLVAAAQCCQ ELYPGAITEN VEQDTPSKQR RTFITFSADT RFAMDITKVR EVIESPCDLM KPPNVAKSVA GLFNLREEII TLLDLRILYD LKETQTTHQK VVIFQSEGQK YGILVDTVNE IIMTTADRVL PFQASTARGN TAVHEDVSEM VQVAGGNNQS VSTMVLDVDA LVRHTIDH
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