Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3235 |
Symbol | |
ID | 4075377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 236057 |
End bp | 236863 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638004744 |
Product | phosphonate ABC transporter permease |
Protein accession | YP_611471 |
Protein GI | 99078213 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC GCCCCGATAA CTTGCCAGAG AGCTGGCGCA AGCCACCCTT CATCGCCAAT GCCGCTCTGC GGTATGTGCT GTATCTCGGC GTCGCGGTCT ATATCATCTT CACCCTCGCC ACGCTCCCGA TTGACTGGGA TCGTGTGGCT GATGGGATGA CCCGCGCTCA GCGGATCTTC AACGGGGCAT TCCCGCCCAG TTTCGATCGC GCGGGGCTGT TGTTTGATGG CTTCATGGAA AGCCTGAAGA TCGCCATTCT CGCCACCGTC GGTGGTATCC TGATCTCGGT CCCGCTTGCT TTTATGGCAG CCGCAAATAT CGCGCCGAAA CCGATCTATT TGCTGGGGCG CGGGCTGATC ATCATCGCGC GCAGTTTCCA CCCGGTGATC GTGGCGATCA TCTTTGTCAA AGCCGTAGGC TTTGGTCCCT TTGCGGGCGC CCTGACACTG GTGGTCTATT CCGTGGGCTT CGTCGCCAAG CTGCTGGCCG AGCGCATTGA AGAGATCGAT TTTGGGCAGG TGGAAGCCAT GCGCTCCGCC GGGGCCGGGT TCCTAACAAC GCAGGTCTAT GCGGTGCTGC CACAGATCAT GCCACGCCTC GTGGGGCTCG GTATATATCA GCTCGACAGC AATCTCAGAG CCTCTGCCGT GGTCGGTATC GTTGGCGCAG GCGGCATCGG GGCAACCCTC GCCAATGCCT TTGGCCGCTA CGACTATGAT TTTGCCCTCG CCATCACCAT GGTTATCGTC GGTGTCATCC TCATTTCTGA GGCTGTGAGC GGCGTCATCC GAAAGCGTAT CACATGA
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Protein sequence | MSTRPDNLPE SWRKPPFIAN AALRYVLYLG VAVYIIFTLA TLPIDWDRVA DGMTRAQRIF NGAFPPSFDR AGLLFDGFME SLKIAILATV GGILISVPLA FMAAANIAPK PIYLLGRGLI IIARSFHPVI VAIIFVKAVG FGPFAGALTL VVYSVGFVAK LLAERIEEID FGQVEAMRSA GAGFLTTQVY AVLPQIMPRL VGLGIYQLDS NLRASAVVGI VGAGGIGATL ANAFGRYDYD FALAITMVIV GVILISEAVS GVIRKRIT
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