| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3233 |
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| Symbol | |
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| ID | 4075375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 234200 |
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| End bp | 235180 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004742 |
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| Product | phosphonate-binding periplasmic protein |
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| Protein accession | YP_611469 |
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| Protein GI | 99078211 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.73019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCAT TCATCACCCG TGCGATTGGC GCACTGGGCA TTCTGACGTG CTCCACCATC
GCCGCTCAGG CGCAAGACTG CGCGGAGCGT GGCGCGCTTG ATCTGCAGTA TTGCGACGTC
AACGGCGATC TCGTCGCCGA CACGCCGACC GATCCGGCAG AGCTGAGCGA TCCGGATACG
CTCGTTTTTG CCTACACCCC GGTCGAGGAT CCGGCGGTCT ATGCTGACAT TTGGGAGCCG
TTCATCGAGC ATCTCGCTGA CGTCACCGGC AAGGACGTAC AGTTCTTTGC AGTGCAGTCG
AACTCCGCCG AGGTTGAGGC GATGCGCTCT GGCCGTCTGC ATGTGGCAGG TTTTTCGACC
GGACCGACGC CTTTCGCCGT GAACCTTGCA GGCGCCGTGC CGTTTGCAAT CATGGGTGCC
GAGGATGGCC AGTTTGGCTA TAAGCTGCAG GTCTTCACCC AGGCCGACAG CGACATCAAG
GACGTCTCTG ACCTTGCAGG CAAGCGCGTC GCGCATACCT CGCCCACTTC GAACTCTGGC
AACCAGGCAC CGCGCGCACT GTTCCCGGGC TTGGGCGTCG AGCCTGACAA AGACTACGAA
GTTGTCTATT CCGGCTCGCA CGACCAATCC ATGCTCGGCG TAGTTGCCGG GGATTACGAC
GCAGCCCCGG TTGCATCCGA GGTTGTGGAA CGCATGGCGG AACGCGGGCT TTATGATCCG
GCAGACGTGC GCATGATCTG GGAAAGCGAT CCGTTCCCAA CCACGTCTTT CACCATGGCG
CATAACCTTG ATCCCGCGCT GGCCGAAAAA GTCAAAGAGG CGTTCTTCAC CTTTGATTTT
GCTGGCACCG CGCTTGGCGA GGAATTTGAT GGCGTGTCGA AATTCGTGCC CATCACCTAC
AAGGACCAGT GGGCCGTGAT CCGTCAGATC CAGGCTTCCA ACGGCGTGGA ATACACGCCC
CAGGGTCTCG CCGGGAACTA A
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| Protein sequence | MTPFITRAIG ALGILTCSTI AAQAQDCAER GALDLQYCDV NGDLVADTPT DPAELSDPDT
LVFAYTPVED PAVYADIWEP FIEHLADVTG KDVQFFAVQS NSAEVEAMRS GRLHVAGFST
GPTPFAVNLA GAVPFAIMGA EDGQFGYKLQ VFTQADSDIK DVSDLAGKRV AHTSPTSNSG
NQAPRALFPG LGVEPDKDYE VVYSGSHDQS MLGVVAGDYD AAPVASEVVE RMAERGLYDP
ADVRMIWESD PFPTTSFTMA HNLDPALAEK VKEAFFTFDF AGTALGEEFD GVSKFVPITY
KDQWAVIRQI QASNGVEYTP QGLAGN
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