| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3230 |
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| Symbol | |
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| ID | 4075372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 228329 |
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| End bp | 230506 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004739 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_611466 |
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| Protein GI | 99078208 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.857008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCA ATATTTCCCG TCGTGGGTTT CTGAAAACCG CAGCCGCCGC GGGCGCGGTG
CTTTATGTTG GGGCCACAGC TGACGGCGCT GCCGCTGCAG GGTCGTCGGA TGCGATGCTG
AATCCTTTTG TGAAGATCGA CAGCGATGGC AACATCATTG CGATCATCAA GCATTTTGAA
AAAGGACAAG GACCCGCCAC CGGCCTCTCC ACGCTGATTG CCGAAGAACT TGGCGTGACC
ATGGAGCAGA TTGGCTACGA ATTCGCCCCC TCCGACCCGC AGGTTTACAA CAACCTTTTG
TTTGGTCCTT TTCAGGGTAC TGGCGGCTCA ACCGCCATGG CCAATTCCTG GATGCAGTAC
CGCACAGCTG GTGCGATTGC ACGTGAGATG CTGATCAAGG CGGCAGCGCA GGCTTGGGGC
TTGGACACCG CAGATTTGGA CATCCAAGAC GGCATGGTGA CTGGCGGTGG AAAGTCCGCG
CCACTTGGAG ACTTTGTCGC GGCAGCGGCA GAGATCGCTC CATCTGAAAC GCCACGTTTG
CGGGACCAAT CCGAGTGGAA GATCATCGGA AAAGAGAGCA CACGACGCCT GGATAGCGCG
ATCAAAGTCA ATGGTCAGGC GCAGTTTGGC ATGGATCTGC ACCTGCCGAA CCAAATGGTC
GTCATGATCA AACGCACGCC ACAGCGTGGC GGCGTGGTGG CCGGATTTGA TGACAGCGCA
GCCAAGGACG TTAAAGGGTT CATCATGGCA ATGCCGCTCC CGACCAAACA TGGTGTTGCG
GTTTACGCCG AAAACACCTG GACCGCGATG CAGGCGCGGG CAGCGGTCGA AGTCGACTGG
GATATGTCTG CTGCCGAAAC GCGTTCCTCG CAGGAAATCC GCGACGAAAT CATGGCCGCG
TTGGATGCCG CGCCAGTGTA CAATGTGAAC AAGGCCGATA CAAACGCCGT CGCTTTGGCG
GTCGATGAGG CAGCGCAAGT CTTGGAAAAG ACATTCTATT TCCCGCTTCT TGCCCATGCG
CCGATGGAGC CGATGAACTG CACCATTGAA CAAACAGCGG ATGGCGACAT CGTCCTGCAT
GATGGGGCGC AGATGCCAAC CGGCCCGCAT ATGGCCTATC AGCAGATCTT TGGTCTCCCC
GCCGAGAAAA TCCACATCAA CACGATGCTG GCGGGCGGCT CCTTCGGGCG ACGGGCAACG
CCGGATGCTG ATTACCAGGT GGAAGCGGGT CTGGCGTTTG CGATGACCGA TCGCTCTCGC
CCGGTGAAGC TGGTCTGGGA TCGGGAAGAC GACATTCGTG GTGGCTACTA CCGTCCGGCG
ACGGGGCATA AGGTGCGGAT CGGGCTCGAC GCAGACGGCA AGATTACTGG ATGGGAGCAT
CAGGTCGCAG GTCAGTCGAT CATGAAAGGC ACAGCCTTTG AAGCGATGGC CGTCAAGGAT
GGCATTGACC ACTCCACCGT CGAAGGTCTG GCCGACAACC CTTATGTGAT CCCAAACATG
GCCGTTGGTC TGACAGACAC CGAAAAGGCC ACCTCCGTGC TGTGGTGGCG CTCGGTTGGG
CACACGCACA CCGCGTATGT GATGGAGGTC ATGATGGATA TGGCCGCCAA GGCCGCTGGG
CGTGATCCGG TCGAGTTCCG CTTGGCCTAC CTTGAGGGCG GCAACAAAGA TGCGCAGCGC
AAAGCTGGCG TTCTGAAGCT CGCGGCCGAG AAAGGGAACT GGGGCAACCC TGCGGCAGGC
AATGTCCAAG GTATCGCGGT GCACAAGTCG TTTGGGTCGT TTGTCGCTGA GGTCGTCGAA
GTGTCGGGCA CACCCGACGA TGGCATCCAG ATCGAAAAGG TCACGGCTGC CGTCGATTGC
GGCATTGCAG TAAACCCGGA TGTCATCCGG GCCCAGACCG AAGGCGCCAT CGGGTATGGC
ATCGGTCATG CGATGCGGGA CCAGATCACA CTCGATGGTG GCGAGGTGGA GCAATACAAC
TTCCCGGACT ACGAGCCACT TCGGATCTCT GACATCAAGG CGATCGAGAC GCATATTGTG
GCGTCTGCTG AAGCACCGAC CGGCATTGGG GAACCGGGTA CTCCGCCCTC GGCCCCAGCG
TTGGCGAATG CGATCGCACA GTTGGATGTT CGCGTTGCAG AGCTCCCGAT GAGCGAAAAC
GGCGTGTCCT TCGCCTAA
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| Protein sequence | MTANISRRGF LKTAAAAGAV LYVGATADGA AAAGSSDAML NPFVKIDSDG NIIAIIKHFE
KGQGPATGLS TLIAEELGVT MEQIGYEFAP SDPQVYNNLL FGPFQGTGGS TAMANSWMQY
RTAGAIAREM LIKAAAQAWG LDTADLDIQD GMVTGGGKSA PLGDFVAAAA EIAPSETPRL
RDQSEWKIIG KESTRRLDSA IKVNGQAQFG MDLHLPNQMV VMIKRTPQRG GVVAGFDDSA
AKDVKGFIMA MPLPTKHGVA VYAENTWTAM QARAAVEVDW DMSAAETRSS QEIRDEIMAA
LDAAPVYNVN KADTNAVALA VDEAAQVLEK TFYFPLLAHA PMEPMNCTIE QTADGDIVLH
DGAQMPTGPH MAYQQIFGLP AEKIHINTML AGGSFGRRAT PDADYQVEAG LAFAMTDRSR
PVKLVWDRED DIRGGYYRPA TGHKVRIGLD ADGKITGWEH QVAGQSIMKG TAFEAMAVKD
GIDHSTVEGL ADNPYVIPNM AVGLTDTEKA TSVLWWRSVG HTHTAYVMEV MMDMAAKAAG
RDPVEFRLAY LEGGNKDAQR KAGVLKLAAE KGNWGNPAAG NVQGIAVHKS FGSFVAEVVE
VSGTPDDGIQ IEKVTAAVDC GIAVNPDVIR AQTEGAIGYG IGHAMRDQIT LDGGEVEQYN
FPDYEPLRIS DIKAIETHIV ASAEAPTGIG EPGTPPSAPA LANAIAQLDV RVAELPMSEN
GVSFA
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