| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3212 |
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| Symbol | |
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| ID | 4075316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 207380 |
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| End bp | 208021 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004721 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_611448 |
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| Protein GI | 99078190 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.402928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA CCGACCCCCA AAAACCCAAA TTTCGCCGAG AGAACCCCGA ACAGCGGCGC
GAGCAGTTGA TTGAGGCGAC GCTTCGTGTG ATCGCGCGCA AGGGTGTCAT GGGGGCAACC
GTGCGTGAAA TCTCGGCCGA AGCCGGTGTA GCCTTCAGCC TGATCCGCCA TCACTTCAAC
ACAAAAGAAG ATCTCATGTA TGCCGCATAT GCGCATCACA TGCAGCGGAT GGCTCAACTA
TCGCTTGCGT CAGCCGGAGA TTCCGATCGC TCGCCCATCG ACAGGATGCG CCAGTGTATC
CACGACACGT TGTCTTTGCC TGTCACCAAA AGCGAGAGCC TCCAGATCTG GGCTGGTTTC
ATTCAGATGG TGCCCCATGA CGCGCGCATG AAGCAGATCC ACATCGACAC TTATCTGGGG
TTTCGGGCCA CGTTGGAGAC CCTAATCAAA GACGCGCTGC AGGCGGCGGA CTCGCATTCA
ACACCCGACC AGATCGAGGC CAAGGCGATT GCCTGCAACG CGGTTCTGGA CGGCCTCTGG
CTCGAAGGCT CGATGCTCCC CGACATGTTG CCCCCCGCAC AACTGATCGA AATCGCCGAG
ACAACGATCA TGGGCATTAT CGGCCCGCAT TCAGACACTT AA
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| Protein sequence | MTKTDPQKPK FRRENPEQRR EQLIEATLRV IARKGVMGAT VREISAEAGV AFSLIRHHFN
TKEDLMYAAY AHHMQRMAQL SLASAGDSDR SPIDRMRQCI HDTLSLPVTK SESLQIWAGF
IQMVPHDARM KQIHIDTYLG FRATLETLIK DALQAADSHS TPDQIEAKAI ACNAVLDGLW
LEGSMLPDML PPAQLIEIAE TTIMGIIGPH SDT
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