Gene TM1040_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3207 
Symbol 
ID4075311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp202188 
End bp202562 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content57% 
IMG OID638004716 
Productresponse regulator receiver protein 
Protein accessionYP_611443 
Protein GI99078185 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.138724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA AAGTTCTGGC AATCGACGAC TCCCGGACGA TCCGAAACCT GCTGGCAGCA 
ACGCTGGAAG AGGCCGGTTT CGAATATCAC TGCGCGGTAG ATGGGCGTGA GGGCGTTGAC
ATGTACGACG ACGTTGCCCC CGACGTTGTG ATTACAGACA TCAACATGCC CAATCTCGAC
GGCTTTGGTG TGATCGAGGA GTTGCGCGGC GACGGTATCA ACTCCAAGGT TCCGATCCTT
GTTCTGACGA CCGAGAGCGC GCCCGAGATG AAAGCGCGTG CCCGTGATGC CGGCGCAACC
GGTTGGATCA CCAAACCCTT TGATGACCAA TCCCTGATCT TCGCGCTCAA GCGCGTTACA
GGAGCGGTCG CATAA
 
Protein sequence
MKTKVLAIDD SRTIRNLLAA TLEEAGFEYH CAVDGREGVD MYDDVAPDVV ITDINMPNLD 
GFGVIEELRG DGINSKVPIL VLTTESAPEM KARARDAGAT GWITKPFDDQ SLIFALKRVT
GAVA