Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3207 |
Symbol | |
ID | 4075311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 202188 |
End bp | 202562 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638004716 |
Product | response regulator receiver protein |
Protein accession | YP_611443 |
Protein GI | 99078185 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.138724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA AAGTTCTGGC AATCGACGAC TCCCGGACGA TCCGAAACCT GCTGGCAGCA ACGCTGGAAG AGGCCGGTTT CGAATATCAC TGCGCGGTAG ATGGGCGTGA GGGCGTTGAC ATGTACGACG ACGTTGCCCC CGACGTTGTG ATTACAGACA TCAACATGCC CAATCTCGAC GGCTTTGGTG TGATCGAGGA GTTGCGCGGC GACGGTATCA ACTCCAAGGT TCCGATCCTT GTTCTGACGA CCGAGAGCGC GCCCGAGATG AAAGCGCGTG CCCGTGATGC CGGCGCAACC GGTTGGATCA CCAAACCCTT TGATGACCAA TCCCTGATCT TCGCGCTCAA GCGCGTTACA GGAGCGGTCG CATAA
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Protein sequence | MKTKVLAIDD SRTIRNLLAA TLEEAGFEYH CAVDGREGVD MYDDVAPDVV ITDINMPNLD GFGVIEELRG DGINSKVPIL VLTTESAPEM KARARDAGAT GWITKPFDDQ SLIFALKRVT GAVA
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