Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3179 |
Symbol | |
ID | 4075349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 162710 |
End bp | 165367 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638004682 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_611415 |
Protein GI | 99078157 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.498273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGTC AAATCGGCCC CAAAGGAGCA AAGTTCCTGC GCCGCCTCAA CCCGCTTTCC AGTATTCGCG GCAAGATTAC ATTCATTTTG CTGGCATTGC TGATGATGGT CGGTGGCGCG GGCTATCTGA TCCTTCAGTC GTTCGACCGC GTGTCACGCA GTGTCGGAGA AATGACGGAG CGGGACCTGC CGCAGCTCGC GCAGAGCAAT GGTCTTATTC TGGCCGCCAC CAAGACCAAG GATGCGATGA TCGAAATCTT GATGTCGCAA AACCCCGAGG CCTTGAAAAA CGCGGCGACC CATGTCGAGA CGGCCTCGAC CGAACTTGCA TCTGCCGTCG CCGCGCTCCC CGCCGAGCAG CAGCAGGCCT TTGAGGCGGA TCTGGCCAAA GTGGGCGCAA CATTGCAGGC CTCGATCGAC GCCCGCGCGA CGTCCTTTGC CAACACAGAC CAGCTCAATG CGATGACGCA GGATCTGCAG CGTCTGGCGG CGGACCTGCA GGCGGTCCTG CTGGAAACCG CAGATGACGC ATATTTCAAT ACAGCGATGA AGGGCGAAGA CACGATCACC TCGATCGAGG AGACGTTGTT TGATCTGGCT GAAAACAAGT TCGCCACCCT GCAAACCGTG TTGGAAATTC GCGCCGAAAT CAACTTTCTC TCTGGCATCA CTCTGGCGAT GTCCTCCACC ACCGATCGGT CGATGTTGTC GATCTTCGGC GATCTGGCGA TCTCGTCGCG GGACCGGTTG TCCGGTGCGA TCAGCTCCCT TGACGGGACC GATGCAGGTG CAACCGCAGG CGAGGACCTT GCCATGATCT CTGCCGCGCT CTCGGACGCG GTGGCAGCAG GGCGCGAGGG CCGCGCCGTT GACCGCGATG CGGTACTTTC CACCCGGCGG GAGGCTGATG CGGTGCTGTC TTCGACAGTG GATGATCTCG TCTTTGAGCT GACAATTGCC GCCGACGATG CGGCAACCGG CAACCGAGAT GCGATCCAGG GGCTGCTCGA CAACGAAGTT GCCTTCCTCA ACCGGCTGCT GGAGATCAGT TCCTGGCTCA GCGCCTTCCA GATCGAAGCC CTGAAAATCG CAACCGCGCA GACCTTTGAA CAGGCTGAGG TTGCCTCAAA AGCAATGCAG GCCGCCTCGG GCGCCCTGGC GGGCTTTAGC GAGTTTGGCG GAGGTATCCT TGCGGACCAG ATCGCGCAGA TGGCGGCCAT GGCGGATCCG GACACAGGCC TTGCCGCCTT TCGGATCAAG TCCCTCGAAG CCAATCAGGC TGCAACCGAG GCGGCTTCGG CCACTGTGAA TGCAGTGCTG CAGATCGCCG GTCAGGCCTC CCTGCGCGGA TTGGAAAGCC AGACCACGAT CACCAATCAG GCTCTGGGCA TCGCCGCGGA CGCGACCGAG GTGCAAGCCA ACCTGCAGAC GATTGGCTGG ATCGCACTGG CCTTCGTGGG TGTCGCACTC CTTCTCAGCC ACGTCCTGAT CATCCGCCCG CTCAATGCGA TCAGCCTCAC CACCGAGCGG CTGTCACAGG GTGACATGAG CCCGGTGACC GGCTTCAACC GGGCCAGCGA CGAAATTGCA CGGATCGCGC GCGCGCTGAC CGTGTTCCGC GACGGGTTGG TCGAAAAAGA AGAACTCACC CGGATCGCCG ATGAGGAACG GGCCGAAAAC CAGGCCCGTC AGACCGCCGC TGTCGAAGCG ATTGGCATGG GGCTGGCACG CCTCGCCCGA GGCGACCTGA CCTATCGCAT CGATCAGGAG CTCACAGAGG GTTACGCCCA GCTCAAGGAA GACTTCAACA GCACGGCGCA GACCTTGAAC ATGACGGTTG TGGACGTGGT GCAGCTGGCG GATTCGATCC GCAATGGCTC GTCCGAAATC AGCCAGGCCT CTGATGATCT CTCGCAACGC ACCGAAAGCC AGGCCGCGAC GCTGGAAGAA ACCGCCGCCG CGCTCGAGGA GCTGACCGCC AGTGTGCGCT CTGCCGCAGA GGGCGCGCGG GATGCGGAAA ACACCACGAA CAAGGCGCGC GAGCAGGCCA CCCAGAACGG TCAGGTCGTC GAGCAGGCCG TCACCGCCAT GCAGGAGATC GAGAGCAGTT CGAGCCAAAT CGAACAGATC ATCGGCGTGA TTGACGACAT CGCCTTTCAG ACCAACCTGC TGGCATTGAA TGCCGGCGTC GAAGCGGCGC GGGCGGGCGA AGCCGGGCGC GGTTTTGCTG TGGTGGCCTC CGAGGTGCGC GGCCTCTCGC AACGCACAAC CGAAGCCGCA CGCGACATCA AGGAGCTGAT TTCCAAGAGC AGCACCCAAG TCGAAGCCGG GGTGGATCTG GTCGGACGCG CCGGACAGGC GCTTGGCGAC ATCCTTGAAC GGGTGACCCA TATCTCGGGG CTGGTCAGCA CGATTGCTGA ATCAACTGAC GAGCAGGCCA CGGGGCTCGG TGAGGCCAAT GTCGCGGTCT CACAGCTGGA TCAGGTGACT CAGCAAAACG CTGCAATGGT CGAAGAAACC AACGCCGCCG GACAATTGCT GCGTCAGGAT GCGGAGAAAC TGGCAACCCT GATGGCGAAC TTTACCGTGT CGTCAATCTC CTCGTCGGCG CAGGCTCCGG CAGAGCACGG GTCAAGCGCG CCAGAGCAGG CTGCGTGA
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Protein sequence | MLRQIGPKGA KFLRRLNPLS SIRGKITFIL LALLMMVGGA GYLILQSFDR VSRSVGEMTE RDLPQLAQSN GLILAATKTK DAMIEILMSQ NPEALKNAAT HVETASTELA SAVAALPAEQ QQAFEADLAK VGATLQASID ARATSFANTD QLNAMTQDLQ RLAADLQAVL LETADDAYFN TAMKGEDTIT SIEETLFDLA ENKFATLQTV LEIRAEINFL SGITLAMSST TDRSMLSIFG DLAISSRDRL SGAISSLDGT DAGATAGEDL AMISAALSDA VAAGREGRAV DRDAVLSTRR EADAVLSSTV DDLVFELTIA ADDAATGNRD AIQGLLDNEV AFLNRLLEIS SWLSAFQIEA LKIATAQTFE QAEVASKAMQ AASGALAGFS EFGGGILADQ IAQMAAMADP DTGLAAFRIK SLEANQAATE AASATVNAVL QIAGQASLRG LESQTTITNQ ALGIAADATE VQANLQTIGW IALAFVGVAL LLSHVLIIRP LNAISLTTER LSQGDMSPVT GFNRASDEIA RIARALTVFR DGLVEKEELT RIADEERAEN QARQTAAVEA IGMGLARLAR GDLTYRIDQE LTEGYAQLKE DFNSTAQTLN MTVVDVVQLA DSIRNGSSEI SQASDDLSQR TESQAATLEE TAAALEELTA SVRSAAEGAR DAENTTNKAR EQATQNGQVV EQAVTAMQEI ESSSSQIEQI IGVIDDIAFQ TNLLALNAGV EAARAGEAGR GFAVVASEVR GLSQRTTEAA RDIKELISKS STQVEAGVDL VGRAGQALGD ILERVTHISG LVSTIAESTD EQATGLGEAN VAVSQLDQVT QQNAAMVEET NAAGQLLRQD AEKLATLMAN FTVSSISSSA QAPAEHGSSA PEQAA
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